RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 Q86TA4 180 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 ZNF575Q86XF7 245 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 LYPD1Q8N2G4 141 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM75Q8N9X5 138 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM263Q8WUH6 116 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 C8orf49Q96NF6 230 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 LINC00467Q9BRT7 94 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 ZNF471Q9BX82 626 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 AAMDCQ9H7C9 122 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 NACAE9PAV3 2078 aa5.06□□□□□ -1.6
TOPBP1-207ENST00000509162 DEFB131BA0A096LNP1 70 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 TRAV10A0A0B4J240 114 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 TRAV34A0A0B4J273 112 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 A0A1W2PPV4 95 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 H7BYZ3 331 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 CCL20P78556 96 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 FAM74A1Q5RGS3 127 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 MUC21Q5SSG8 566 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 Q6AWC8 147 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 Q6ZTI0 123 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM256Q8N2U0 113 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 FAM213BQ8TBF2 198 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 C16orf74Q96GX8 76 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 LINC00477Q96M19 166 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 LINC01587Q99440 93 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 C20orf144Q9BQM9 153 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 NIPSNAP3BQ9BS92 247 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM208Q9BTX3 173 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 ACTR3CQ9C0K3 210 aaPredicted RBP5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 NOP10Q9NPE3 64 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 GSN-AS1Q9NRJ2 163 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 KLF12Q9Y4X4 402 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 ABCA13Q86UQ4 5058 aa5.05□□□□□ -1.6
TOPBP1-207ENST00000509162 A0A0D9SG52 128 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 TRBV7-9A0A0J9YWB2 115 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM189A5PLL7 270 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 IGLL5B9A064 214 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 CXorf1O96002 111 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 MBP02144 154 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 SEC11BP0C7V7 166 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 HTN1P15515 57 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 RNASE4P34096 147 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 TCL1AP56279 114 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 AKR1C8PQ5T2L2 129 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM78Q5T7P6 136 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM88Q6PEY1 159 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 AKAP14Q86UN6 197 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 C5orf17Q8NAS9 161 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 C2CD4CQ8TF44 421 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 MBD3L1Q8WWY6 194 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 TMEM167BQ9NRX6 74 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 MDFICQ9P1T7 246 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 EPDR1Q9UM22 224 aa5.04□□□□□ -1.6
TOPBP1-207ENST00000509162 PCLOQ9Y6V0 5065 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 IGHV1OR15-1A0A075B7D0 117 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 KANTRA0A1W2PQU2 76 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 A0A1W2PRE2 83 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 LYRM9A8MSI8 78 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 PEX7O00628 323 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 TYMSP04818 313 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 NMBP08949 121 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 SPART-AS1P0CW21 52 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 DEFB130BP0DP73 79 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 DEFB130AP0DP74 79 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 HTN3P15516 51 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 PCP4P48539 62 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 CRIP1P50238 77 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 KRTAP10-2P60368 255 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 ANXA2RQ3ZCQ2 193 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 IQCF2Q8IXL9 164 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 POM121L12Q8N7R1 296 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 CYB561D1Q8N8Q1 229 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 PYGO2Q9BRQ0 406 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 MRPL16Q9NX20 251 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 PSG8Q9UQ74 426 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 ARL2-SNX15V9GYD0 113 aa5.03□□□□□ -1.6
TOPBP1-207ENST00000509162 IGHV3-16A0A0C4DH30 117 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 C11orf94C9JXX5 98 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 SPINK4O60575 86 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 PAGE4O60829 102 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 GAGE7O76087 117 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 LY6G6CO95867 125 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 GPX1P07203 203 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 GAGE12FP0CL80 117 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 GAGE12GP0CL81 117 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 GAGE12IP0CL82 117 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 TPT1P13693 172 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 DAD1P61803 113 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 DAZ2Q13117 558 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 TDRG1Q3Y452 100 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 DPPA3Q6W0C5 159 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 EIF4E3Q8N5X7 224 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 ARL6IP6Q8N6S5 226 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 RXFP4Q8TDU9 374 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 ZC2HC1AQ96GY0 325 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 VSIG2Q96IQ7 327 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 ATG101Q9BSB4 218 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 DERL1Q9BUN8 251 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 LENEPQ9Y5L5 61 aa5.02□□□□□ -1.61
TOPBP1-207ENST00000509162 MUC4Q99102 2169 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms