RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 VSIG2Q96IQ7 327 aa16.94■□□□□ 0.3
PROM1-209ENST00000508940 MUC4Q99102 2169 aa16.94■□□□□ 0.3
PROM1-209ENST00000508940 PPT1P50897 306 aa16.93■□□□□ 0.3
PROM1-209ENST00000508940 SMUG1Q53HV7 270 aa16.93■□□□□ 0.3
PROM1-209ENST00000508940 RASL10AQ92737 203 aa16.93■□□□□ 0.3
PROM1-209ENST00000508940 PRO0255Q9UI72 69 aa16.93■□□□□ 0.3
PROM1-209ENST00000508940 TRGV4A0A0C4DH28 118 aa16.92■□□□□ 0.3
PROM1-209ENST00000508940 IGHV3-16A0A0C4DH30 117 aa16.92■□□□□ 0.3
PROM1-209ENST00000508940 GCGP01275 180 aa16.92■□□□□ 0.3
PROM1-209ENST00000508940 IGLV2-11P01706 119 aa16.92■□□□□ 0.3
PROM1-209ENST00000508940 C1orf134Q5TEV5 83 aa16.92■□□□□ 0.3
PROM1-209ENST00000508940 ZNF471Q9BX82 626 aaPredicted RBP16.92■□□□□ 0.3
PROM1-209ENST00000508940 HHLA3Q9XRX5 114 aa16.92■□□□□ 0.3
PROM1-209ENST00000508940 PRSS29PA6NIE9 313 aa16.91■□□□□ 0.3
PROM1-209ENST00000508940 M0R2P5 195 aa16.91■□□□□ 0.3
PROM1-209ENST00000508940 RTL8CO15255 209 aa16.91■□□□□ 0.3
PROM1-209ENST00000508940 TYMSP04818 313 aa16.91■□□□□ 0.3
PROM1-209ENST00000508940 ESRGQ1W209 222 aa16.91■□□□□ 0.3
PROM1-209ENST00000508940 TRAV34A0A0B4J273 112 aa16.9■□□□□ 0.3
PROM1-209ENST00000508940 NBDYA0A0U1RRE5 68 aa16.9■□□□□ 0.3
PROM1-209ENST00000508940 FAM74A7A6NL05 159 aa16.9■□□□□ 0.3
PROM1-209ENST00000508940 PFN1P07737 140 aaKnown RBP16.9■□□□□ 0.3
PROM1-209ENST00000508940 SEC11BP0C7V7 166 aa16.9■□□□□ 0.3
PROM1-209ENST00000508940 ZNF80P51504 273 aaPredicted RBP16.9■□□□□ 0.3
PROM1-209ENST00000508940 EIF5AP63241 154 aaKnown RBP16.9■□□□□ 0.3
PROM1-209ENST00000508940 FHL2Q14192 279 aa16.9■□□□□ 0.3
PROM1-209ENST00000508940 Q9H8V8 135 aa16.9■□□□□ 0.3
PROM1-209ENST00000508940 ICOSQ9Y6W8 199 aa16.9■□□□□ 0.3
PROM1-209ENST00000508940 A0A096LPF7 62 aa16.89■□□□□ 0.29
PROM1-209ENST00000508940 PEX7O00628 323 aa16.89■□□□□ 0.29
PROM1-209ENST00000508940 BCL2L11O43521 198 aa16.89■□□□□ 0.29
PROM1-209ENST00000508940 HIST1H2BAQ96A08 127 aa16.89■□□□□ 0.29
PROM1-209ENST00000508940 LINC00479Q96M42 142 aa16.89■□□□□ 0.29
PROM1-209ENST00000508940 FRAS1Q86XX4 4008 aa16.88■□□□□ 0.29
PROM1-209ENST00000508940 UMAD1C9J7I0 102 aa16.88■□□□□ 0.29
PROM1-209ENST00000508940 PFDN1O60925 122 aa16.88■□□□□ 0.29
PROM1-209ENST00000508940 SFTA3P0C7M3 94 aa16.88■□□□□ 0.29
PROM1-209ENST00000508940 CRYBA4P53673 196 aa16.88■□□□□ 0.29
PROM1-209ENST00000508940 DNAH10Q8IVF4 4471 aa16.88■□□□□ 0.29
PROM1-209ENST00000508940 FHITP49789 147 aa16.87■□□□□ 0.29
PROM1-209ENST00000508940 CST9LP1Q5W188 147 aa16.87■□□□□ 0.29
PROM1-209ENST00000508940 OR4C5Q8NGB2 326 aa16.87■□□□□ 0.29
PROM1-209ENST00000508940 FAM213BQ8TBF2 198 aa16.87■□□□□ 0.29
PROM1-209ENST00000508940 ZNF479Q96JC4 524 aa16.87■□□□□ 0.29
PROM1-209ENST00000508940 MRPS16Q9Y3D3 137 aaKnown RBP16.87■□□□□ 0.29
PROM1-209ENST00000508940 ARL2-SNX15V9GYD0 113 aa16.87■□□□□ 0.29
PROM1-209ENST00000508940 TRAV4A0A0B4J268 109 aa16.86■□□□□ 0.29
PROM1-209ENST00000508940 TMUB2Q71RG4 321 aa16.86■□□□□ 0.29
PROM1-209ENST00000508940 SFT2D1Q8WV19 159 aa16.86■□□□□ 0.29
PROM1-209ENST00000508940 UPK3BQ9BT76 320 aa16.86■□□□□ 0.29
PROM1-209ENST00000508940 MRPL23Q16540 153 aaKnown RBP16.85■□□□□ 0.29
PROM1-209ENST00000508940 C11orf21Q9P2W6 132 aa16.85■□□□□ 0.29
PROM1-209ENST00000508940 FABP5P3A8MUU1 101 aa16.84■□□□□ 0.29
PROM1-209ENST00000508940 PCNPQ8WW12 178 aaKnown RBP16.84■□□□□ 0.29
PROM1-209ENST00000508940 C9JCJ5 164 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 TPT1P13693 172 aaKnown RBP16.83■□□□□ 0.28
PROM1-209ENST00000508940 UBE2G1P62253 170 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 TTC32Q5I0X7 151 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 DPPA3Q6W0C5 159 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 Q86TA4 180 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 C6orf223Q8N319 242 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 MBD3L1Q8WWY6 194 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 TCEAL7Q9BRU2 100 aa16.83■□□□□ 0.28
PROM1-209ENST00000508940 FMC1Q96HJ9 113 aa16.82■□□□□ 0.28
PROM1-209ENST00000508940 ZFP30Q9Y2G7 519 aa16.82■□□□□ 0.28
PROM1-209ENST00000508940 A0A1B0GV50 99 aa16.81■□□□□ 0.28
PROM1-209ENST00000508940 PAGE4O60829 102 aa16.81■□□□□ 0.28
PROM1-209ENST00000508940 ORM1P02763 201 aa16.81■□□□□ 0.28
PROM1-209ENST00000508940 ZNF876PQ49A33 203 aa16.81■□□□□ 0.28
PROM1-209ENST00000508940 NEGR1Q7Z3B1 354 aa16.81■□□□□ 0.28
PROM1-209ENST00000508940 H2AFB1P0C5Y9 115 aa16.8■□□□□ 0.28
PROM1-209ENST00000508940 GYPEP15421 78 aa16.8■□□□□ 0.28
PROM1-209ENST00000508940 S100A4P26447 101 aaKnown RBP16.8■□□□□ 0.28
PROM1-209ENST00000508940 SRIP30626 198 aa16.8■□□□□ 0.28
PROM1-209ENST00000508940 A0A1B0GVY2 172 aa16.79■□□□□ 0.28
PROM1-209ENST00000508940 AKR1C3P42330 323 aa16.79■□□□□ 0.28
PROM1-209ENST00000508940 C9orf85Q96MD7 179 aa16.79■□□□□ 0.28
PROM1-209ENST00000508940 K7EQD1 137 aa16.78■□□□□ 0.28
PROM1-209ENST00000508940 LGALSLQ3ZCW2 172 aaPredicted RBP16.78■□□□□ 0.28
PROM1-209ENST00000508940 IGKV3D-20A0A0C4DH25 116 aa16.77■□□□□ 0.28
PROM1-209ENST00000508940 A0A1W2PPQ1 181 aa16.77■□□□□ 0.28
PROM1-209ENST00000508940 CIDEAO60543 219 aa16.77■□□□□ 0.28
PROM1-209ENST00000508940 EIF5AL1Q6IS14 154 aaKnown RBP16.77■□□□□ 0.28
PROM1-209ENST00000508940 LYPD5Q6UWN5 251 aa16.77■□□□□ 0.28
PROM1-209ENST00000508940 TCTE3Q8IZS6 198 aa16.77■□□□□ 0.28
PROM1-209ENST00000508940 TXNDC17Q9BRA2 123 aa16.77■□□□□ 0.28
PROM1-209ENST00000508940 TRBV6-1A0A0K0K1D8 114 aa16.76■□□□□ 0.27
PROM1-209ENST00000508940 B4DEV8 164 aa16.76■□□□□ 0.27
PROM1-209ENST00000508940 SIVA1O15304 175 aa16.76■□□□□ 0.27
PROM1-209ENST00000508940 NXPH4O95158 308 aa16.76■□□□□ 0.27
PROM1-209ENST00000508940 RNASE3P12724 160 aaKnown RBP16.76■□□□□ 0.27
PROM1-209ENST00000508940 ASIPP42127 132 aa16.76■□□□□ 0.27
PROM1-209ENST00000508940 PTH2Q96A98 100 aa16.76■□□□□ 0.27
PROM1-209ENST00000508940 ZC2HC1AQ96GY0 325 aa16.76■□□□□ 0.27
PROM1-209ENST00000508940 PGPEP1LA6NFU8 196 aa16.75■□□□□ 0.27
PROM1-209ENST00000508940 RS1O15537 224 aa16.75■□□□□ 0.27
PROM1-209ENST00000508940 FAM162BQ5T6X4 162 aa16.75■□□□□ 0.27
PROM1-209ENST00000508940 S100A9P06702 114 aaKnown RBP16.74■□□□□ 0.27
PROM1-209ENST00000508940 ZNF506Q5JVG8 444 aa16.74■□□□□ 0.27
PROM1-209ENST00000508940 CFAP126Q5VTH2 177 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms