RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 OR8J3Q8NGG0 315 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 BOKQ9UMX3 212 aaPredicted RBP0.48□□□□□ -2.33
SMN2-208ENST00000508258 LSM2Q9Y333 95 aaKnown RBP0.48□□□□□ -2.33
SMN2-208ENST00000508258 MYO18AQ92614 2054 aaKnown RBP0.48□□□□□ -2.33
SMN2-208ENST00000508258 BICRAQ9NZM4 1560 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 PRRC2BQ5JSZ5 2229 aaKnown RBP0.48□□□□□ -2.33
SMN2-208ENST00000508258 UNC13CQ8NB66 2214 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 LAMA4Q16363 1823 aa0.48□□□□□ -2.33
SMN2-208ENST00000508258 CPDO75976 1380 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 TMEM30CPA0ZSE6 113 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 M0R2P5 195 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 NCR2O95944 276 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 IGKCP01834 107 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 LINC00694P0DN24 101 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 RHOHQ15669 191 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 LYPD5Q6UWN5 251 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 SLC25A26Q70HW3 274 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 SMIM3Q9BZL3 60 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 MRPL35Q9NZE8 188 aaKnown RBP0.47□□□□□ -2.33
SMN2-208ENST00000508258 COPZ2Q9P299 210 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 ADGRB1O14514 1584 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 VIRMAQ69YN4 1812 aaKnown RBP0.47□□□□□ -2.33
SMN2-208ENST00000508258 TET1Q8NFU7 2136 aa0.47□□□□□ -2.33
SMN2-208ENST00000508258 FCGBPQ9Y6R7 5405 aaPredicted RBP0.47□□□□□ -2.33
SMN2-208ENST00000508258 MUC4Q99102 2169 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 NCOA6Q14686 2063 aaPredicted RBP0.46□□□□□ -2.34
SMN2-208ENST00000508258 TRBV20-1A0A075B6N2 111 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 TRAV2A0A0B4J234 112 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 NBDYA0A0U1RRE5 68 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 CXorf51AA0A1B0GTR3 108 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 FAM236AA0A1B0GUQ0 79 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 FAM236BA0A1B0GV22 79 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 A0A1W2PPM0 123 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 K7EIL1 84 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 TPST1O60507 370 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 YPEL1O60688 119 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 RBP4P02753 201 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 NCS1P62166 190 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 CLLU1Q5K131 121 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 XAF1Q6GPH4 301 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 ATP11AUNQ6ZP68 121 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 Q6ZQY7 126 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 SNX29P2Q8IUI4 249 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 CTAGE3PQ8IX95 158 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 MMGT1Q8N4V1 131 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 ATP6V0E2Q8NHE4 81 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 DMAC1Q96GE9 116 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 CCL19Q99731 98 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 TAS2R8Q9NYW2 309 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 MRPL36Q9P0J6 103 aaKnown RBP0.46□□□□□ -2.34
SMN2-208ENST00000508258 ERCC6Q03468 1493 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 CDK12Q9NYV4 1490 aaPredicted RBP0.46□□□□□ -2.34
SMN2-208ENST00000508258 HELZP42694 1942 aaKnown RBP0.46□□□□□ -2.34
SMN2-208ENST00000508258 PLXNA2O75051 1894 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 TRPM7Q96QT4 1865 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 ROS1P08922 2347 aa0.46□□□□□ -2.34
SMN2-208ENST00000508258 CHD3Q12873 2000 aaKnown RBP0.45□□□□□ -2.34
SMN2-208ENST00000508258 FANCMQ8IYD8 2048 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 CASZ1Q86V15 1759 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 CCDC171Q6TFL3 1326 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 EML5Q05BV3 1969 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 TRBV10-1A0A0K0K1A3 114 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 TRBV30A0A0K0K1B3 111 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 HIGD1CA8MV81 97 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 M0R2Z0 102 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 HMGN1P05114 100 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 COX4I1P13073 169 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 IL7P13232 177 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 POLR2JP52435 117 aaKnown RBP0.45□□□□□ -2.34
SMN2-208ENST00000508258 FXYD3Q14802 87 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 PPDPFLQ8WWR9 84 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 TCEAL4Q96EI5 215 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 TPT1P8Q9HAU6 139 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 PAIP2BQ9ULR5 123 aaKnown RBP0.45□□□□□ -2.34
SMN2-208ENST00000508258 NOP16Q9Y3C1 178 aaKnown RBP0.45□□□□□ -2.34
SMN2-208ENST00000508258 PTPRMP28827 1452 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 ZCCHC6Q5VYS8 1495 aaKnown RBP0.45□□□□□ -2.34
SMN2-208ENST00000508258 CDK5RAP2Q96SN8 1893 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 SOGA1O94964 1423 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 CITO14578 2027 aa0.45□□□□□ -2.34
SMN2-208ENST00000508258 CNTRLQ7Z7A1 2325 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 RREB1Q92766 1687 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 LOC101927531A0A1B0GV80 90 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 ZNF670-ZNF695F2Z2N8 137 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 J3QLW9 94 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 J3QR89 54 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 NPFFO15130 113 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 NDUFA2O43678 99 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 PITX3O75364 302 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 RPS25P62851 125 aaKnown RBP0.44□□□□□ -2.34
SMN2-208ENST00000508258 PRB3Q04118 309 aaPredicted RBP0.44□□□□□ -2.34
SMN2-208ENST00000508258 UNQ5815/PRO19632Q6UWF5 114 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 C10orf99Q6UWK7 81 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 Q6ZS92 163 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 C5orf56Q8N8D9 126 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 TSTD1Q8NFU3 115 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 DYNLRB2Q8TF09 96 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 PFDN5Q99471 154 aa0.44□□□□□ -2.34
SMN2-208ENST00000508258 ATG5Q9H1Y0 275 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms