RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 IGHV4-39P01824 125 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 CCKP06307 115 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 DAZ2Q13117 558 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 C2orf83Q53S99 150 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 C10orf113Q5VZT2 155 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 DAZ4Q86SG3 579 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 DAZ3Q9NR90 486 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 TET2Q6N021 2002 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 UNC80Q8N2C7 3258 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 IGHV1-58A0A0C4DH39 117 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 WNT9BO14905 357 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 XCL1P47992 114 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 RNF185Q96GF1 192 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 XCL2Q9UBD3 114 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 ICOSQ9Y6W8 199 aa8.2□□□□□ -1.1
PDLIM5-210ENST00000508216 IBA57-AS1B1ANH7 110 aa8.19□□□□□ -1.1
PDLIM5-210ENST00000508216 PAX4O43316 350 aa8.19□□□□□ -1.1
PDLIM5-210ENST00000508216 NSUN5P1Q3KNT7 163 aa8.19□□□□□ -1.1
PDLIM5-210ENST00000508216 FAM27BQ5VT28 67 aa8.19□□□□□ -1.1
PDLIM5-210ENST00000508216 Q8IYB0 196 aa8.19□□□□□ -1.1
PDLIM5-210ENST00000508216 TMEM14BQ9NUH8 114 aa8.19□□□□□ -1.1
PDLIM5-210ENST00000508216 CABIN1Q9Y6J0 2220 aa8.19□□□□□ -1.1
PDLIM5-210ENST00000508216 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
PDLIM5-210ENST00000508216 MORN5Q5VZ52 161 aa8.18□□□□□ -1.1
PDLIM5-210ENST00000508216 AMELXQ99217 191 aa8.18□□□□□ -1.1
PDLIM5-210ENST00000508216 UBE2D4Q9Y2X8 147 aa8.18□□□□□ -1.1
PDLIM5-210ENST00000508216 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 H0YGG7 62 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 M0R1B8 84 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 SAA4P35542 130 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 LYPD5Q6UWN5 251 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 C16orf47Q6ZP98 133 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 NFAM1Q8NET5 270 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 VKORC1L1Q8N0U8 176 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 THAP8Q8NA92 274 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 MRPL53Q96EL3 112 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
PDLIM5-210ENST00000508216 USF3Q68DE3 2245 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 IGHV3OR16-10A0A075B7F0 116 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 TRAV3A0A0B4J244 114 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 TIMM17BO60830 172 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 Q1RN00 199 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 FAM223AQ8IWN6 122 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 ZNF491Q8N8L2 437 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 TOMM6Q96B49 74 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 TM2D3Q9BRN9 247 aa8.16□□□□□ -1.1
PDLIM5-210ENST00000508216 C11orf86A6NJI1 115 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 FAM223BA6NKX1 122 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 IGF1P05019 195 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 RNASE2P10153 161 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 CD40P25942 277 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 HOXD3P31249 432 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 SNRPD3P62318 126 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 PATE2Q6UY27 113 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 NUP37Q8NFH4 326 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 Q9H3A6 140 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.1
PDLIM5-210ENST00000508216 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.11
PDLIM5-210ENST00000508216 IGKV3-11P04433 115 aa8.15□□□□□ -1.11
PDLIM5-210ENST00000508216 FAM53AQ6NSI3 398 aaPredicted RBP8.15□□□□□ -1.11
PDLIM5-210ENST00000508216 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.11
PDLIM5-210ENST00000508216 UBALD1Q8TB05 177 aa8.15□□□□□ -1.11
PDLIM5-210ENST00000508216 EEF1AKMT3Q96AZ1 226 aa8.15□□□□□ -1.11
PDLIM5-210ENST00000508216 PRCDQ00LT1 54 aa8.14□□□□□ -1.11
PDLIM5-210ENST00000508216 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
PDLIM5-210ENST00000508216 Q8N2B8 174 aa8.14□□□□□ -1.11
PDLIM5-210ENST00000508216 LYPD1Q8N2G4 141 aa8.14□□□□□ -1.11
PDLIM5-210ENST00000508216 DEFB118Q96PH6 123 aa8.14□□□□□ -1.11
PDLIM5-210ENST00000508216 FSCN3Q9NQT6 498 aa8.14□□□□□ -1.11
PDLIM5-210ENST00000508216 FOXF2Q12947 444 aa8.13□□□□□ -1.11
PDLIM5-210ENST00000508216 RANBP2P49792 3224 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 CCL21O00585 134 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 UBE2E1P51965 193 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 SUB1P53999 127 aaKnown RBP eCLIP8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 UBE2E2Q96LR5 201 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 FGF23Q9GZV9 251 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 UNC13CQ8NB66 2214 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 TRAV7A0A075B6U4 112 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 IGLV3-32A0A0A0MS00 114 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 TRAV13-2A0A0B4J235 113 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 SMKR1H3BMG3 65 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 CRIP1P50238 77 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 PLGLAQ15195 96 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 NRACQ8N912 160 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 KLF14Q8TD94 323 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 PRO3102Q9H379 93 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 U3KQE9 123 aa8.12□□□□□ -1.11
PDLIM5-210ENST00000508216 CEP290O15078 2479 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 SPTBN5Q9NRC6 3674 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 BRCA2P51587 3418 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 IGHV1OR21-1A0A087WYE8 117 aa8.11□□□□□ -1.11
PDLIM5-210ENST00000508216 IGHV1-69DA0A0B4J2H0 117 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms