RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 IGHV3-16A0A0C4DH30 117 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 LOC100131303A0A0U1RQF7 123 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 C9JCJ5 164 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 M0R2P5 195 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 GNRH2O43555 120 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 TYMSP04818 313 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 EVI2AP22794 236 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 ACOT6Q3I5F7 207 aaPredicted RBP7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 FAM74A1Q5RGS3 127 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 OR4C5Q8NGB2 326 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 TVP23CQ96ET8 276 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 TXNDC17Q9BRA2 123 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 WFDC1Q9HC57 220 aa7.81□□□□□ -1.16
HMGCS1-204ENST00000507293 TRAV8-1A0A0A6YYK1 113 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 A0A1W2PPV4 95 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 XGP55808 180 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 KRTAP10-1P60331 282 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 RAB2AP61019 212 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 GNG5P63218 68 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 PQLC2Q6ZP29 291 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 TREM1Q9NP99 234 aa7.8□□□□□ -1.16
HMGCS1-204ENST00000507293 K7EP13 123 aa7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 HMGB3O15347 200 aaKnown RBP7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 CRYGDP07320 174 aa7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 PPT1P50897 306 aa7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 C10orf126Q8N4M7 172 aa7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 NHLRC2Q8NBF2 726 aa7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 ASB13Q8WXK3 278 aa7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 SDF2L1Q9HCN8 221 aa7.79□□□□□ -1.16
HMGCS1-204ENST00000507293 GATA1P15976 413 aaPredicted RBP7.78□□□□□ -1.16
HMGCS1-204ENST00000507293 SH2D6Q7Z4S9 175 aa7.78□□□□□ -1.16
HMGCS1-204ENST00000507293 ARL6IP6Q8N6S5 226 aa7.78□□□□□ -1.16
HMGCS1-204ENST00000507293 OR10G9Q8NGN4 311 aa7.78□□□□□ -1.16
HMGCS1-204ENST00000507293 OR10G7Q8NGN6 311 aa7.78□□□□□ -1.16
HMGCS1-204ENST00000507293 KCNS1Q96KK3 526 aa7.78□□□□□ -1.16
HMGCS1-204ENST00000507293 SGK494Q96LW2 274 aa7.78□□□□□ -1.16
HMGCS1-204ENST00000507293 FBLL1A6NHQ2 334 aaKnown RBP7.77□□□□□ -1.17
HMGCS1-204ENST00000507293 ARL14EPLP0DKL9 152 aa7.77□□□□□ -1.17
HMGCS1-204ENST00000507293 CDC34P49427 236 aaPredicted RBP7.77□□□□□ -1.17
HMGCS1-204ENST00000507293 TIRAPP58753 221 aa7.77□□□□□ -1.17
HMGCS1-204ENST00000507293 Q5VSD8 79 aa7.77□□□□□ -1.17
HMGCS1-204ENST00000507293 NDFIP1Q9BT67 221 aa7.77□□□□□ -1.17
HMGCS1-204ENST00000507293 IGHV3-38A0A0C4DH36 116 aa7.76□□□□□ -1.17
HMGCS1-204ENST00000507293 INAFM2P0DMQ5 153 aa7.76□□□□□ -1.17
HMGCS1-204ENST00000507293 GCSHP23434 173 aa7.76□□□□□ -1.17
HMGCS1-204ENST00000507293 ZNF80P51504 273 aaPredicted RBP7.76□□□□□ -1.17
HMGCS1-204ENST00000507293 SLC25A29Q8N8R3 303 aa7.76□□□□□ -1.17
HMGCS1-204ENST00000507293 FRZBQ92765 325 aa7.76□□□□□ -1.17
HMGCS1-204ENST00000507293 C11orf21Q9P2W6 132 aa7.76□□□□□ -1.17
HMGCS1-204ENST00000507293 SERTM2A0A1B0GWG4 89 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 RS1O15537 224 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 PSCAO43653 123 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 TCRAP04437 139 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 GIPP09681 153 aaPredicted RBP7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 STAG3L2P0CL84 134 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 STAG3L3P0CL85 134 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 RHOHQ15669 191 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 ZNF876PQ49A33 203 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 LINC01556Q5JQF7 62 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 DPPA3Q6W0C5 159 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 C5orf17Q8NAS9 161 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 HSD17B11Q8NBQ5 300 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 PRADC1Q9BSG0 188 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 PSG8Q9UQ74 426 aa7.75□□□□□ -1.17
HMGCS1-204ENST00000507293 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 IGHV3-73A0A0B4J1V6 119 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 TRAV8-6A0A0B4J262 113 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 LRCOL1A6NCL2 159 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 TAAR5O14804 337 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 GCGP01275 180 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 PFN1P07737 140 aaKnown RBP7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 GCHFRP30047 84 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 HAMPP81172 84 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 OR10J3Q5JRS4 329 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 CFAP126Q5VTH2 177 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 OR2G3Q8NGZ4 309 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 RAB24Q969Q5 203 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 C9orf85Q96MD7 179 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 Q9HAA7 133 aa7.74□□□□□ -1.17
HMGCS1-204ENST00000507293 TRBV6-4A0A1B0GX49 114 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 GGTLC3B5MD39 225 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 K7EQM0 130 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 CIDEAO60543 219 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 IGLV2-11P01706 119 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 IGHV3-30P01768 117 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 IGHV3-33P01772 117 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 IGHV3-30-3P0DP02 117 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 IGHV3-30-5P0DP03 117 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 ATP6V0CP27449 155 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 ZFP69Q49AA0 526 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 ZNF506Q5JVG8 444 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 SUN5Q8TC36 379 aa7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 PSMG3Q9BT73 122 aaPredicted RBP7.73□□□□□ -1.17
HMGCS1-204ENST00000507293 FAT1Q14517 4588 aa7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 PGPEP1LA6NFU8 196 aa7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 SUMO1P63165 101 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms