RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MRPL53Q96EL3 112 aaKnown RBP4.43□□□□□ -1.7
VCAN-207ENST00000507162 RTBDNQ9BSG5 229 aaPredicted RBP4.43□□□□□ -1.7
VCAN-207ENST00000507162 C20orf85Q9H1P6 137 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.42□□□□□ -1.7
VCAN-207ENST00000507162 SMIM31A0A1B0GVY4 71 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 PRSS46E5RG02 174 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 SCGB1D1O95968 90 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 IFNA7P01567 189 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 CD3DP04234 171 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 SMIM18P0DKX4 95 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 HIST1H1EP10412 219 aaKnown RBP4.42□□□□□ -1.7
VCAN-207ENST00000507162 COX6A2Q02221 97 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 SURF2Q15527 256 aaPredicted RBP4.42□□□□□ -1.7
VCAN-207ENST00000507162 GUK1Q16774 197 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 CFAP126Q5VTH2 177 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 Q6ZRP5 223 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 OR51S1Q8NGJ8 323 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 ZNF492Q9P255 531 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 TIMM9Q9Y5J7 89 aa4.42□□□□□ -1.7
VCAN-207ENST00000507162 LOC100506127A0A0U1RQW1 187 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 H3BP45 60 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 GOSR2O14653 212 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 TCRBP04435 133 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 INPP1P49441 399 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 RRAS2P62070 204 aaPredicted RBP4.41□□□□□ -1.7
VCAN-207ENST00000507162 SLC38A11Q08AI6 406 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 ZNF876PQ49A33 203 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 ZNF546Q86UE3 836 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 EXOC3-AS1Q8N2X6 119 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 OR2T35Q8NGX2 323 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 LINC00479Q96M42 142 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 SAMD10Q9BYL1 202 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 SLC39A9Q9NUM3 307 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 Q9UF83 564 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 PRELID1Q9Y255 219 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
VCAN-207ENST00000507162 A0A0B4J2A0 478 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 AGPAT2O15120 278 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 CIDEAO60543 219 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 MED6O75586 246 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 TSPAN13O95857 204 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 ANGP03950 147 aaKnown RBP4.4□□□□□ -1.71
VCAN-207ENST00000507162 SLPIP03973 132 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 MGST1P10620 155 aaKnown RBP4.4□□□□□ -1.71
VCAN-207ENST00000507162 ZNF138P52744 262 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 CNBPP62633 177 aaKnown RBP4.4□□□□□ -1.71
VCAN-207ENST00000507162 C10orf113Q5VZT2 155 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 NUDT10Q8NFP7 164 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 NUDT11Q96G61 164 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 CIB3Q96Q77 187 aaPredicted RBP4.4□□□□□ -1.71
VCAN-207ENST00000507162 ATP5SQ99766 215 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 SOSTQ9BQB4 213 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 SHPKQ9UHJ6 478 aa4.4□□□□□ -1.71
VCAN-207ENST00000507162 STRAPQ9Y3F4 350 aaKnown RBP4.4□□□□□ -1.71
VCAN-207ENST00000507162 TRBV19A0A075B6N1 114 aa4.39□□□□□ -1.71
VCAN-207ENST00000507162 B5MCH6 92 aa4.39□□□□□ -1.71
VCAN-207ENST00000507162 ZNF266Q14584 549 aa4.39□□□□□ -1.71
VCAN-207ENST00000507162 PXDC1Q5TGL8 231 aa4.39□□□□□ -1.71
VCAN-207ENST00000507162 INO80EQ8NBZ0 244 aaPredicted RBP4.39□□□□□ -1.71
VCAN-207ENST00000507162 PRSS3P2Q8NHM4 247 aa4.39□□□□□ -1.71
VCAN-207ENST00000507162 CHCHD7Q9BUK0 85 aa4.39□□□□□ -1.71
VCAN-207ENST00000507162 SYNGR2O43760 224 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 NDUFB4O95168 129 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 RAB3DO95716 219 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 HOXB5P09067 269 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 FGF8P55075 233 aaPredicted RBP4.38□□□□□ -1.71
VCAN-207ENST00000507162 MIAQ16674 131 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 Q6AWC8 147 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 CLPSL2Q6UWE3 100 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 AAMDCQ9H7C9 122 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 GPN1Q9HCN4 374 aaPredicted RBP4.38□□□□□ -1.71
VCAN-207ENST00000507162 NPVFQ9HCQ7 196 aa4.38□□□□□ -1.71
VCAN-207ENST00000507162 DIRC3C9JPN6 131 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 NDUFS6O75380 124 aaKnown RBP4.37□□□□□ -1.71
VCAN-207ENST00000507162 TYMSP04818 313 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 LINC00694P0DN24 101 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 CAV2P51636 162 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 FAAP20Q6NZ36 180 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 C14orf178Q8N769 122 aaPredicted RBP4.37□□□□□ -1.71
VCAN-207ENST00000507162 OR2G3Q8NGZ4 309 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 VCXQ9H320 206 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 CCDC59Q9P031 241 aaKnown RBP4.37□□□□□ -1.71
VCAN-207ENST00000507162 COMMD3Q9UBI1 195 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
VCAN-207ENST00000507162 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 IGLV10-54A0A075B6I4 117 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 CTDSPLO15194 276 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 PYYP10082 97 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 TBPP20226 339 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 RAB5CP51148 216 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 MPV17L2Q567V2 206 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 IZUMO2Q6UXV1 221 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 Q6ZRG5 221 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 CROCCP3Q8IVE0 287 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 PSENENQ9NZ42 101 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 MGAT4CQ9UBM8 478 aa4.36□□□□□ -1.71
VCAN-207ENST00000507162 TRAV1-1A0A0B4J248 108 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 TRBV7-9A0A0J9YWB2 115 aa4.35□□□□□ -1.71
VCAN-207ENST00000507162 DISC1C4P0D8 188 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms