RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 NAGKQ9UJ70 344 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 RPH3ALQ9UNE2 315 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 ALG5Q9Y673 324 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 LY96Q9Y6Y9 160 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 K7EQD1 137 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 EVI2AP22794 236 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 ERVFC1-1P60608 527 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 Q6ZQT7 251 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 TNFSF18Q9UNG2 199 aa9.88□□□□□ -0.83
HMGCS1-203ENST00000507004 RYR1P21817 5038 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 IGHV3-16A0A0C4DH30 117 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 TAAR5O14804 337 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 CXorf1O96002 111 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 GYPEP15421 78 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 TIRAPP58753 221 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 HSD17B11Q8NBQ5 300 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 INO80EQ8NBZ0 244 aaPredicted RBP9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 SUN5Q8TC36 379 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 RAB24Q969Q5 203 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 ZNF479Q96JC4 524 aa9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 ACTR3CQ9C0K3 210 aaPredicted RBP9.87□□□□□ -0.83
HMGCS1-203ENST00000507004 TCRAP04437 139 aa9.86□□□□□ -0.83
HMGCS1-203ENST00000507004 GIPP09681 153 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-203ENST00000507004 SAPCD1Q5SSQ6 148 aa9.86□□□□□ -0.83
HMGCS1-203ENST00000507004 SH3BGRL3Q9H299 93 aa9.86□□□□□ -0.83
HMGCS1-203ENST00000507004 BORCS7-ASMTA0A0B4J1R7 106 aa9.85□□□□□ -0.83
HMGCS1-203ENST00000507004 TYMSP04818 313 aa9.85□□□□□ -0.83
HMGCS1-203ENST00000507004 SFTA3P0C7M3 94 aa9.85□□□□□ -0.83
HMGCS1-203ENST00000507004 ATP6V0CP27449 155 aa9.85□□□□□ -0.83
HMGCS1-203ENST00000507004 GCHFRP30047 84 aa9.85□□□□□ -0.83
HMGCS1-203ENST00000507004 Q6ZRN7 208 aaPredicted RBP9.85□□□□□ -0.83
HMGCS1-203ENST00000507004 PTH2Q96A98 100 aa9.85□□□□□ -0.83
HMGCS1-203ENST00000507004 TRAV8-1A0A0A6YYK1 113 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 A0A1W2PRE2 83 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 F6UZH7 168 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 HMGB3O15347 200 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 GNRH2O43555 120 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 PFN1P07737 140 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 DNAH10OSP0CZ25 163 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 PPT1P50897 306 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 SMUG1Q53HV7 270 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 CYB561D1Q8N8Q1 229 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 TMEM75Q8N9X5 138 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 NKX6-2Q9C056 277 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 PSG8Q9UQ74 426 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
HMGCS1-203ENST00000507004 GATA1P15976 413 aaPredicted RBP9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 SUMO1P63165 101 aaKnown RBP9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 GNG5P63218 68 aa9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 FLI1Q01543 452 aaPredicted RBP9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 ZNF876PQ49A33 203 aa9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 TVP23CQ96ET8 276 aa9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 EPDR1Q9UM22 224 aa9.83□□□□□ -0.84
HMGCS1-203ENST00000507004 LRP1BQ9NZR2 4599 aa9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 TRBV6-4A0A1B0GX49 114 aa9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 EIF3GO75821 320 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 GCGP01275 180 aa9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 RHOHQ15669 191 aa9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 PIK3CD-AS1Q5SR53 167 aa9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 Q8N1X5 172 aa9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 NHLRC2Q8NBF2 726 aa9.82□□□□□ -0.84
HMGCS1-203ENST00000507004 TRAV8-6A0A0B4J262 113 aa9.81□□□□□ -0.84
HMGCS1-203ENST00000507004 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
HMGCS1-203ENST00000507004 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 CTXND1A0A1B0GTU2 59 aa9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 RS1O15537 224 aa9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 MGST1P10620 155 aaKnown RBP9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 HIST1H2BAQ96A08 127 aa9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
HMGCS1-203ENST00000507004 GGTLC3B5MD39 225 aa9.79□□□□□ -0.84
HMGCS1-203ENST00000507004 CRYGDP07320 174 aa9.79□□□□□ -0.84
HMGCS1-203ENST00000507004 LINC01556Q5JQF7 62 aa9.79□□□□□ -0.84
HMGCS1-203ENST00000507004 SGK494Q96LW2 274 aa9.79□□□□□ -0.84
HMGCS1-203ENST00000507004 TCEAL7Q9BRU2 100 aa9.79□□□□□ -0.84
HMGCS1-203ENST00000507004 A0A087WTM6 91 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 FXYD6-FXYD2A0A087WZ82 144 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 A8MWV9 139 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 IFNA7P01567 189 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 AKR1C8PQ5T2L2 129 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 ZFP2Q6ZN57 461 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 SLC25A29Q8N8R3 303 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 OR2T35Q8NGX2 323 aa9.78□□□□□ -0.84
HMGCS1-203ENST00000507004 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
HMGCS1-203ENST00000507004 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
HMGCS1-203ENST00000507004 LELP1Q5T871 98 aa9.77□□□□□ -0.85
HMGCS1-203ENST00000507004 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms