RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 GCGP01275 180 aa10.81□□□□□ -0.68
MED28-204ENST00000506409 TYMSP04818 313 aa10.81□□□□□ -0.68
MED28-204ENST00000506409 FHITP49789 147 aa10.81□□□□□ -0.68
MED28-204ENST00000506409 Q6ZR54 194 aa10.81□□□□□ -0.68
MED28-204ENST00000506409 VSIG2Q96IQ7 327 aa10.81□□□□□ -0.68
MED28-204ENST00000506409 BIRC6Q9NR09 4857 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 TRAV34A0A0B4J273 112 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 IGHV3-16A0A0C4DH30 117 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 UMAD1C9J7I0 102 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 PEX7O00628 323 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 PFDN1O60925 122 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 PPT1P50897 306 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 ZNF80P51504 273 aaPredicted RBP10.8□□□□□ -0.68
MED28-204ENST00000506409 EIF5AP63241 154 aaKnown RBP10.8□□□□□ -0.68
MED28-204ENST00000506409 SMUG1Q53HV7 270 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 SAPCD1Q5SSQ6 148 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 LINC00336Q6ZUF6 198 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 ZNRF2Q8NHG8 242 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 RASL10AQ92737 203 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 LINC00479Q96M42 142 aa10.8□□□□□ -0.68
MED28-204ENST00000506409 PFN1P07737 140 aaKnown RBP10.79□□□□□ -0.68
MED28-204ENST00000506409 FAM213BQ8TBF2 198 aa10.79□□□□□ -0.68
MED28-204ENST00000506409 HIST1H2BAQ96A08 127 aa10.79□□□□□ -0.68
MED28-204ENST00000506409 PRO0255Q9UI72 69 aa10.79□□□□□ -0.68
MED28-204ENST00000506409 A0A096LPF7 62 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 M0R2P5 195 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 PAX4O43316 350 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 SLAQ13239 276 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 TMUB2Q71RG4 321 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 SFT2D1Q8WV19 159 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 C11orf21Q9P2W6 132 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 ARL2-SNX15V9GYD0 113 aa10.78□□□□□ -0.68
MED28-204ENST00000506409 TRGV4A0A0C4DH28 118 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 RTL8CO15255 209 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 TPT1P13693 172 aaKnown RBP10.77□□□□□ -0.69
MED28-204ENST00000506409 CRYBA4P53673 196 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 FHL2Q14192 279 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 ESRGQ1W209 222 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 CST9LP1Q5W188 147 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 DPPA3Q6W0C5 159 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 Q86TA4 180 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 ZNF479Q96JC4 524 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 HHLA3Q9XRX5 114 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 ICOSQ9Y6W8 199 aa10.77□□□□□ -0.69
MED28-204ENST00000506409 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
MED28-204ENST00000506409 SOHLH1Q5JUK2 328 aa10.76□□□□□ -0.69
MED28-204ENST00000506409 C1orf134Q5TEV5 83 aa10.76□□□□□ -0.69
MED28-204ENST00000506409 TCTE3Q8IZS6 198 aa10.76□□□□□ -0.69
MED28-204ENST00000506409 MBD3L1Q8WWY6 194 aa10.76□□□□□ -0.69
MED28-204ENST00000506409 TCEAL7Q9BRU2 100 aa10.76□□□□□ -0.69
MED28-204ENST00000506409 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 A0A1B0GV50 99 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 PAGE4O60829 102 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 Q6ZNX1 250 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 OR4C5Q8NGB2 326 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 FMC1Q96HJ9 113 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 UPK3BQ9BT76 320 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 Q9H8V8 135 aa10.75□□□□□ -0.69
MED28-204ENST00000506409 MRPS16Q9Y3D3 137 aaKnown RBP10.75□□□□□ -0.69
MED28-204ENST00000506409 H2AFB1P0C5Y9 115 aa10.74□□□□□ -0.69
MED28-204ENST00000506409 UBE2G1P62253 170 aa10.74□□□□□ -0.69
MED28-204ENST00000506409 DNAH2Q9P225 4427 aa10.74□□□□□ -0.69
MED28-204ENST00000506409 FABP5P3A8MUU1 101 aa10.73□□□□□ -0.69
MED28-204ENST00000506409 C9JCJ5 164 aa10.73□□□□□ -0.69
MED28-204ENST00000506409 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
MED28-204ENST00000506409 LGALSLQ3ZCW2 172 aaPredicted RBP10.73□□□□□ -0.69
MED28-204ENST00000506409 ZNF876PQ49A33 203 aa10.73□□□□□ -0.69
MED28-204ENST00000506409 ZFP30Q9Y2G7 519 aa10.73□□□□□ -0.69
MED28-204ENST00000506409 IGKV3D-20A0A0C4DH25 116 aa10.72□□□□□ -0.69
MED28-204ENST00000506409 AKR1C3P42330 323 aa10.72□□□□□ -0.69
MED28-204ENST00000506409 EIF5AL1Q6IS14 154 aaKnown RBP10.72□□□□□ -0.69
MED28-204ENST00000506409 PCNPQ8WW12 178 aaKnown RBP10.72□□□□□ -0.69
MED28-204ENST00000506409 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
MED28-204ENST00000506409 C1QBP02746 253 aa10.71□□□□□ -0.69
MED28-204ENST00000506409 ORM1P02763 201 aa10.71□□□□□ -0.69
MED28-204ENST00000506409 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.69
MED28-204ENST00000506409 S100A4P26447 101 aaKnown RBP10.71□□□□□ -0.69
MED28-204ENST00000506409 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
MED28-204ENST00000506409 COX8CQ7Z4L0 72 aa10.71□□□□□ -0.69
MED28-204ENST00000506409 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.69
MED28-204ENST00000506409 FAT2Q9NYQ8 4349 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 TRBV6-1A0A0K0K1D8 114 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 A0A1B0GVY2 172 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 K7EQD1 137 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 LTAP01374 205 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 GYPEP15421 78 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 SRIP30626 198 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 ASIPP42127 132 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 CRIP1P50238 77 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 RAB5CP51148 216 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 FAM162BQ5T6X4 162 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 C6orf223Q8N319 242 aa10.7□□□□□ -0.7
MED28-204ENST00000506409 hCG_2014768A0A024R1R8 64 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 SCO2A0A1W2PP80 73 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 PGPEP1LA6NFU8 196 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 B4DEV8 164 aa10.69□□□□□ -0.7
MED28-204ENST00000506409 SH2D1AO60880 128 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms