RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 K7EP34 96 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 M0R381 172 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 DPM2O94777 84 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 IGHV3-11P01762 117 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 LAGE3Q14657 143 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 GPHB5Q86YW7 130 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 CHAC1Q9BUX1 264 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 F6UB75 175 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 ARL3P36405 182 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 LCNL1Q6ZST4 164 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 GLMPQ8WWB7 406 aa12.19□□□□□ -0.46
DDX41-205ENST00000505081 TRBV25-1A0A075B6N4 114 aa12.18□□□□□ -0.46
DDX41-205ENST00000505081 LY6EQ16553 131 aa12.18□□□□□ -0.46
DDX41-205ENST00000505081 PIFOQ8TCI5 191 aa12.18□□□□□ -0.46
DDX41-205ENST00000505081 GTF2H5Q6ZYL4 71 aa12.18□□□□□ -0.46
DDX41-205ENST00000505081 A0A1W2PPM0 123 aa12.17□□□□□ -0.46
DDX41-205ENST00000505081 CRYBG3Q68DQ2 2970 aa12.17□□□□□ -0.46
DDX41-205ENST00000505081 MYOZ3Q8TDC0 251 aa12.17□□□□□ -0.46
DDX41-205ENST00000505081 ITLN2Q8WWU7 325 aaPredicted RBP12.17□□□□□ -0.46
DDX41-205ENST00000505081 SPCS1Q9Y6A9 102 aa12.17□□□□□ -0.46
DDX41-205ENST00000505081 ATP5LO75964 103 aa12.17□□□□□ -0.46
DDX41-205ENST00000505081 UCNP55089 124 aa12.17□□□□□ -0.46
DDX41-205ENST00000505081 MRPL53Q96EL3 112 aaKnown RBP12.17□□□□□ -0.46
DDX41-205ENST00000505081 MEGF9Q9H1U4 602 aa12.17□□□□□ -0.46
DDX41-205ENST00000505081 RPL11P62913 178 aaKnown RBP12.16□□□□□ -0.46
DDX41-205ENST00000505081 DEFB104AQ8WTQ1 72 aa12.16□□□□□ -0.46
DDX41-205ENST00000505081 RPL39LQ96EH5 51 aaKnown RBP12.16□□□□□ -0.46
DDX41-205ENST00000505081 MOB4Q9Y3A3 225 aa12.16□□□□□ -0.46
DDX41-205ENST00000505081 AGRNO00468 2067 aa12.16□□□□□ -0.46
DDX41-205ENST00000505081 ZFAND2AQ8N6M9 145 aa12.16□□□□□ -0.46
DDX41-205ENST00000505081 C14orf178Q8N769 122 aaPredicted RBP12.16□□□□□ -0.46
DDX41-205ENST00000505081 SMIM13P0DJ93 91 aa12.15□□□□□ -0.46
DDX41-205ENST00000505081 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
DDX41-205ENST00000505081 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
DDX41-205ENST00000505081 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.46
DDX41-205ENST00000505081 NHP2Q9NX24 153 aaKnown RBP12.15□□□□□ -0.46
DDX41-205ENST00000505081 IGHV4-4A0A075B6R2 117 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 SRSF1Q07955 248 aaKnown RBP eCLIP12.14□□□□□ -0.472e-6■□□□□ 8.3
DDX41-205ENST00000505081 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 Q6ZS46 218 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.476e-7■■■■□ 23.3
DDX41-205ENST00000505081 K7ERU9 68 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 SRD5A1P18405 259 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 EDN2P20800 178 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 C9orf139Q6ZV77 190 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 GNRH2O43555 120 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
DDX41-205ENST00000505081 RNASE4P34096 147 aaKnown RBP12.14□□□□□ -0.47
DDX41-205ENST00000505081 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 ANXA2RQ3ZCQ2 193 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 RASL10AQ92737 203 aa12.14□□□□□ -0.47
DDX41-205ENST00000505081 A0A087WX48 190 aa12.13□□□□□ -0.47
DDX41-205ENST00000505081 IGHV4-38-2P0DP08 117 aa12.13□□□□□ -0.47
DDX41-205ENST00000505081 HIGD1BQ9P298 99 aa12.13□□□□□ -0.47
DDX41-205ENST00000505081 SMPXQ9UHP9 88 aa12.13□□□□□ -0.47
DDX41-205ENST00000505081 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
DDX41-205ENST00000505081 MGPP08493 103 aa12.13□□□□□ -0.47
DDX41-205ENST00000505081 WFDC12Q8WWY7 111 aa12.13□□□□□ -0.47
DDX41-205ENST00000505081 FAM223BA6NKX1 122 aa12.12□□□□□ -0.47
DDX41-205ENST00000505081 FAM223AQ8IWN6 122 aa12.12□□□□□ -0.47
DDX41-205ENST00000505081 IGHV1-69DA0A0B4J2H0 117 aa12.12□□□□□ -0.47
DDX41-205ENST00000505081 SOCS3O14543 225 aa12.12□□□□□ -0.47
DDX41-205ENST00000505081 IGHV1-69P01742 117 aa12.12□□□□□ -0.47
DDX41-205ENST00000505081 NEGR1Q7Z3B1 354 aa12.12□□□□□ -0.47
DDX41-205ENST00000505081 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
DDX41-205ENST00000505081 IGHV4-61A0A0C4DH41 118 aa12.11□□□□□ -0.47
DDX41-205ENST00000505081 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
DDX41-205ENST00000505081 FABP2P12104 132 aa12.11□□□□□ -0.47
DDX41-205ENST00000505081 BLCAPP62952 87 aa12.11□□□□□ -0.47
DDX41-205ENST00000505081 CEND1Q8N111 149 aa12.11□□□□□ -0.47
DDX41-205ENST00000505081 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
DDX41-205ENST00000505081 PHLDA3Q9Y5J5 127 aa12.11□□□□□ -0.47
DDX41-205ENST00000505081 UTP20O75691 2785 aaKnown RBP12.11□□□□□ -0.47
DDX41-205ENST00000505081 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
DDX41-205ENST00000505081 SUMO2P61956 95 aaKnown RBP12.1□□□□□ -0.47
DDX41-205ENST00000505081 MRAP2Q96G30 205 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 CSMD2Q7Z408 3487 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 PF4V1P10720 104 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 LINC00477Q96M19 166 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 SCGB3A1Q96QR1 104 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 MUC4Q99102 2169 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 TRAV21A0A0B4J279 112 aa12.1□□□□□ -0.47
DDX41-205ENST00000505081 RNF223E7ERA6 249 aa12.09□□□□□ -0.47
DDX41-205ENST00000505081 H3BUX3 64 aa12.09□□□□□ -0.47
DDX41-205ENST00000505081 ASIPP42127 132 aa12.09□□□□□ -0.47
DDX41-205ENST00000505081 NDUFA4O00483 81 aa12.09□□□□□ -0.47
DDX41-205ENST00000505081 GNLYP22749 145 aa12.09□□□□□ -0.47
DDX41-205ENST00000505081 FLNCQ14315 2725 aa12.09□□□□□ -0.47
DDX41-205ENST00000505081 TM2D2Q9BX73 214 aa12.08□□□□□ -0.48
DDX41-205ENST00000505081 DPH3P1Q9H4G8 78 aa12.08□□□□□ -0.48
DDX41-205ENST00000505081 CFAP46Q8IYW2 2715 aa12.08□□□□□ -0.48
DDX41-205ENST00000505081 COTL1Q14019 142 aa12.08□□□□□ -0.48
DDX41-205ENST00000505081 CHTOPQ9Y3Y2 248 aaKnown RBP12.08□□□□□ -0.48
DDX41-205ENST00000505081 F8VRH5 84 aa12.07□□□□□ -0.48
DDX41-205ENST00000505081 H7C1H1 209 aa12.07□□□□□ -0.48
DDX41-205ENST00000505081 OVOL1O14753 267 aa12.07□□□□□ -0.48
DDX41-205ENST00000505081 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms