RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
HOXC9-202ENST00000504557 TMEM75Q8N9X5 138 aa9.89□□□□□ -0.83
HOXC9-202ENST00000504557 ZNF471Q9BX82 626 aaPredicted RBP9.89□□□□□ -0.83
HOXC9-202ENST00000504557 IGHV3-16A0A0C4DH30 117 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 KANTRA0A1W2PQU2 76 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 A0A1W2PRE2 83 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 SOHLH1Q5JUK2 328 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 KCNRGQ8N5I3 272 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 ZNF479Q96JC4 524 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 C18orf15Q96N68 181 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 SPXQ9BT56 116 aa9.88□□□□□ -0.83
HOXC9-202ENST00000504557 C9JCJ5 164 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 IGLV2-11P01706 119 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 FHL2Q14192 279 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 SMUG1Q53HV7 270 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 FAM213BQ8TBF2 198 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 KCNS1Q96KK3 526 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 Q9H8V8 135 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 PRO0255Q9UI72 69 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 HHLA3Q9XRX5 114 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 ICOSQ9Y6W8 199 aa9.87□□□□□ -0.83
HOXC9-202ENST00000504557 FAM74A7A6NL05 159 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 H3BNG1 76 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 M0R2P5 195 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 PEX7O00628 323 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 PFDN1O60925 122 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 ZNF345Q14585 488 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 TDRG1Q3Y452 100 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 OR4C5Q8NGB2 326 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 C11orf21Q9P2W6 132 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
HOXC9-202ENST00000504557 A0A0D9SG52 128 aa9.85□□□□□ -0.83
HOXC9-202ENST00000504557 BCL2L11O43521 198 aa9.85□□□□□ -0.83
HOXC9-202ENST00000504557 PFN1P07737 140 aaKnown RBP9.85□□□□□ -0.83
HOXC9-202ENST00000504557 PPT1P50897 306 aa9.85□□□□□ -0.83
HOXC9-202ENST00000504557 CRYBA4P53673 196 aa9.85□□□□□ -0.83
HOXC9-202ENST00000504557 STOML3Q8TAV4 291 aa9.85□□□□□ -0.83
HOXC9-202ENST00000504557 RASL10AQ92737 203 aa9.85□□□□□ -0.83
HOXC9-202ENST00000504557 HMSDA8MTL9 139 aa9.84□□□□□ -0.83
HOXC9-202ENST00000504557 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
HOXC9-202ENST00000504557 Q86TA4 180 aa9.84□□□□□ -0.83
HOXC9-202ENST00000504557 C6orf223Q8N319 242 aa9.84□□□□□ -0.83
HOXC9-202ENST00000504557 SFT2D1Q8WV19 159 aa9.84□□□□□ -0.83
HOXC9-202ENST00000504557 PCNPQ8WW12 178 aaKnown RBP9.84□□□□□ -0.83
HOXC9-202ENST00000504557 MRPS16Q9Y3D3 137 aaKnown RBP9.84□□□□□ -0.83
HOXC9-202ENST00000504557 IGHV3-73A0A0B4J1V6 119 aa9.83□□□□□ -0.84
HOXC9-202ENST00000504557 TRAV4A0A0B4J268 109 aa9.83□□□□□ -0.84
HOXC9-202ENST00000504557 PAGE4O60829 102 aa9.83□□□□□ -0.84
HOXC9-202ENST00000504557 GYPEP15421 78 aa9.83□□□□□ -0.84
HOXC9-202ENST00000504557 UBE2G1P62253 170 aa9.83□□□□□ -0.84
HOXC9-202ENST00000504557 SLAQ13239 276 aa9.83□□□□□ -0.84
HOXC9-202ENST00000504557 TMUB2Q71RG4 321 aa9.83□□□□□ -0.84
HOXC9-202ENST00000504557 LOC100131303A0A0U1RQF7 123 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 A0A1B0GVY2 172 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 SEC11BP0C7V7 166 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 SRIP30626 198 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
HOXC9-202ENST00000504557 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 NKX6-2Q9C056 277 aaPredicted RBP9.82□□□□□ -0.84
HOXC9-202ENST00000504557 HECTD4Q9Y4D8 3996 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 DNAH2Q9P225 4427 aa9.82□□□□□ -0.84
HOXC9-202ENST00000504557 hCG_2014768A0A024R1R8 64 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 FBLL1A6NHQ2 334 aaKnown RBP9.81□□□□□ -0.84
HOXC9-202ENST00000504557 K7EQD1 137 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 M0R036 132 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 NXPH4O95158 308 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 ORM1P02763 201 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 S100A4P26447 101 aaKnown RBP9.81□□□□□ -0.84
HOXC9-202ENST00000504557 AKR1C3P42330 323 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 TNP2Q05952 138 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 NEGR1Q7Z3B1 354 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 NHLRC2Q8NBF2 726 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 HIST1H2BAQ96A08 127 aa9.81□□□□□ -0.84
HOXC9-202ENST00000504557 PGPEP1LA6NFU8 196 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 FABP5P3A8MUU1 101 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 UMAD1C9J7I0 102 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 TPT1P13693 172 aaKnown RBP9.8□□□□□ -0.84
HOXC9-202ENST00000504557 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 ZC2HC1AQ96GY0 325 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 UPK3BQ9BT76 320 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 FAT2Q9NYQ8 4349 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 DNAH17Q9UFH2 4485 aa9.8□□□□□ -0.84
HOXC9-202ENST00000504557 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 GRIFINA4D1Z8 144 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 B4DEV8 164 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 SIVA1O15304 175 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 H2AFB1P0C5Y9 115 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
HOXC9-202ENST00000504557 ASIPP42127 132 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
HOXC9-202ENST00000504557 ZNF506Q5JVG8 444 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 LYPD5Q6UWN5 251 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 FMC1Q96HJ9 113 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
HOXC9-202ENST00000504557 H3BVH4 76 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms