RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 WFDC11Q8NEX6 87 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 OR10AG1Q8NH19 301 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
COL1A1-210ENST00000504289 C11orf21Q9P2W6 132 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 PEMTQ9UBM1 199 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 ITPR3Q14573 2671 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 LINC01619G3V211 115 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 ASIPP42127 132 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 AMN1Q8IY45 258 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 MRAP2Q96G30 205 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 MS4A6AQ9H2W1 248 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 PRO1933Q9H354 126 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 SCRT2Q9NQ03 307 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 CELSR1Q9NYQ6 3014 aa7.38□□□□□ -1.23
COL1A1-210ENST00000504289 IGHV4OR15-8A0A075B7B6 117 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 A0A087WW49 117 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 PPP1R17O96001 155 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 SYNJ2BPP57105 145 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 TDRG1Q3Y452 100 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 PSMG4Q5JS54 123 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 EBLN2Q6P2I7 272 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 RNF185Q96GF1 192 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 MIEN1Q9BRT3 115 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 MAP1LC3AQ9H492 121 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 SIGLEC8Q9NYZ4 499 aa7.37□□□□□ -1.23
COL1A1-210ENST00000504289 TRAV9-2A0A087WT02 112 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 A0A0J9YX75 114 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 K7EMI3 77 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 NXPH4O95158 308 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 CD33P20138 364 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 SPANXN1Q5VSR9 72 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 C10orf99Q6UWK7 81 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 FOXI2Q6ZQN5 318 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 DPF1Q92782 380 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 C14orf144Q96I85 54 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 VPS13CQ709C8 3753 aa7.36□□□□□ -1.23
COL1A1-210ENST00000504289 C2CD3Q4AC94 2353 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 TRAV25A0A0B4J276 109 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 DNAJC9-AS1A6NH13 148 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 A8MTW9 85 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 M0R381 172 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 S100A4P26447 101 aaKnown RBP7.35□□□□□ -1.23
COL1A1-210ENST00000504289 RNASE4P34096 147 aaKnown RBP7.35□□□□□ -1.23
COL1A1-210ENST00000504289 PRR9Q5T870 116 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 Q6ZSV7 163 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 OR1N2Q8NGR9 330 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 ZNF747Q9BV97 191 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 MSRB1Q9NZV6 116 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 RNF114Q9Y508 228 aa7.35□□□□□ -1.23
COL1A1-210ENST00000504289 CCDC168Q8NDH2 2452 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 C7orf71A4D174 169 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 NPYP01303 97 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 HBDP02042 147 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 CSN3P07498 182 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 RNASE1P07998 156 aaKnown RBP7.34□□□□□ -1.23
COL1A1-210ENST00000504289 PRB4P10163 310 aaPredicted RBP7.34□□□□□ -1.23
COL1A1-210ENST00000504289 IFI27P40305 119 aaPredicted RBP7.34□□□□□ -1.23
COL1A1-210ENST00000504289 KRTAP1-1Q07627 177 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 ANXA2RQ3ZCQ2 193 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 TCTEX1D4Q5JR98 221 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 FAM159AQ6UWV7 190 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 POM121L12Q8N7R1 296 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 Q8N8P6 123 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 OR9G4Q8NGQ1 327 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 CLUHP3Q96NS8 147 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 ST20Q9HBF5 79 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 UQCR10Q9UDW1 63 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 CBY1Q9Y3M2 126 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 PHLDA3Q9Y5J5 127 aa7.34□□□□□ -1.23
COL1A1-210ENST00000504289 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 SPATA45Q537H7 98 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 ZNF418Q8TF45 676 aaPredicted RBP7.33□□□□□ -1.24
COL1A1-210ENST00000504289 AP1S3Q96PC3 154 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 JMJD8Q96S16 334 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 C20orf78Q9BR46 151 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 PAM16Q9Y3D7 125 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 TLN2Q9Y4G6 2542 aa7.33□□□□□ -1.24
COL1A1-210ENST00000504289 FLNAP21333 2647 aaKnown RBP7.32□□□□□ -1.24
COL1A1-210ENST00000504289 IGKV3-7A0A075B6H7 116 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 HSBP1L1C9JCN9 74 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 F6UB75 175 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 H3BVH4 76 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 ZNF688P0C7X2 276 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 IGLC3P0DOY3 106 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 EVI2AP22794 236 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 FCER1GP30273 86 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 CDKN1BP46527 198 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 RPL32P62910 135 aaKnown RBP7.32□□□□□ -1.24
COL1A1-210ENST00000504289 FHL3Q13643 280 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 ZNF705AQ6ZN79 300 aaPredicted RBP7.32□□□□□ -1.24
COL1A1-210ENST00000504289 OR11H1Q8NG94 326 aa7.32□□□□□ -1.24
COL1A1-210ENST00000504289 YAE1D1Q9NRH1 226 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms