RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
SNF8-203ENST00000504000 A0A1B0GWB2 263 aa11.4□□□□□ -0.58
SNF8-203ENST00000504000 LINC01548A6NM66 108 aa11.4□□□□□ -0.58
SNF8-203ENST00000504000 F8W1H4 67 aa11.4□□□□□ -0.58
SNF8-203ENST00000504000 SUMO2P61956 95 aaKnown RBP11.4□□□□□ -0.58
SNF8-203ENST00000504000 LMO4P61968 165 aa11.4□□□□□ -0.58
SNF8-203ENST00000504000 TM4SF20Q53R12 229 aa11.4□□□□□ -0.58
SNF8-203ENST00000504000 DCHS2Q6V1P9 2916 aa11.4□□□□□ -0.58
SNF8-203ENST00000504000 TRAV41A0A0B4J266 112 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 LINC01549A6NIU2 74 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 H3BVH4 76 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 FOXI2Q6ZQN5 318 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 ZFAND2AQ8N6M9 145 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 MAPKAPK5-AS1Q8N8E1 139 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 NHP2Q9NX24 153 aaKnown RBP11.4□□□□□ -0.59
SNF8-203ENST00000504000 MOB4Q9Y3A3 225 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 PTPRQQ9UMZ3 2332 aa11.4□□□□□ -0.59
SNF8-203ENST00000504000 IGHV3OR16-13A0A075B7E8 117 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 IGHV3-74A0A0B4J1X5 117 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 IGLL5B9A064 214 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 NDUFA4O00483 81 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 PRR9Q5T870 116 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 POM121L12Q8N7R1 296 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 NEXN-AS1Q8NBZ9 246 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 FAM19A4Q96LR4 140 aa11.39□□□□□ -0.59
SNF8-203ENST00000504000 LRBAP50851 2863 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 SOCS3O14543 225 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 ZNF207O43670 478 aaKnown RBP11.38□□□□□ -0.59
SNF8-203ENST00000504000 OR10J6PQ8NGY7 276 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 RASL10AQ92737 203 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 TRBV7-3A0A075B6L6 115 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 H3BUA1 57 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 RPL32P62910 135 aaKnown RBP11.38□□□□□ -0.59
SNF8-203ENST00000504000 C12orf74Q32Q52 190 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
SNF8-203ENST00000504000 CHTOPQ9Y3Y2 248 aaKnown RBP11.38□□□□□ -0.59
SNF8-203ENST00000504000 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 A0A1W2PPR1 153 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 OR11H12B2RN74 326 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 IGF1P05019 195 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 ASIPP42127 132 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 OR11H1Q8NG94 326 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 OR11H2Q8NH07 326 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 C20orf173Q96LM9 149 aa11.37□□□□□ -0.59
SNF8-203ENST00000504000 MYMXA0A1B0GTQ4 84 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 K7ERJ3 54 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 ARL3P36405 182 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 ZNF479Q96JC4 524 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 NXPH4O95158 308 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 Q6ZQT7 251 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 HIST1H4GQ99525 98 aa11.36□□□□□ -0.59
SNF8-203ENST00000504000 HRNRQ86YZ3 2850 aaPredicted RBP11.35□□□□□ -0.59
SNF8-203ENST00000504000 RIPPLY3P57055 190 aa11.35□□□□□ -0.59
SNF8-203ENST00000504000 PHLDA3Q9Y5J5 127 aa11.35□□□□□ -0.59
SNF8-203ENST00000504000 IGHV4OR15-8A0A075B7B6 117 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 A0A087WW49 117 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 IGHV1-69DA0A0B4J2H0 117 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 S100A4P26447 101 aaKnown RBP11.34□□□□□ -0.59
SNF8-203ENST00000504000 SPOCK3Q9BQ16 436 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 BPESC1Q9GZL8 116 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 RNF223E7ERA6 249 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 J3QR89 54 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
SNF8-203ENST00000504000 PTPRZ1P23471 2315 aaPredicted RBP11.33□□□□□ -0.6
SNF8-203ENST00000504000 ANXA2RQ3ZCQ2 193 aa11.33□□□□□ -0.6
SNF8-203ENST00000504000 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
SNF8-203ENST00000504000 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
SNF8-203ENST00000504000 TMEM238C9JI98 176 aa11.32□□□□□ -0.6
SNF8-203ENST00000504000 RPL24P83731 157 aaKnown RBP11.32□□□□□ -0.6
SNF8-203ENST00000504000 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
SNF8-203ENST00000504000 SCGB1A1P11684 91 aa11.32□□□□□ -0.6
SNF8-203ENST00000504000 SAMD13Q5VXD3 122 aa11.32□□□□□ -0.6
SNF8-203ENST00000504000 UNQ9165/PRO28630Q6UXU0 137 aa11.32□□□□□ -0.6
SNF8-203ENST00000504000 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
SNF8-203ENST00000504000 SPANXB1Q9NS25 103 aaPredicted RBP11.32□□□□□ -0.6
SNF8-203ENST00000504000 RAXQ9Y2V3 346 aa11.32□□□□□ -0.6
SNF8-203ENST00000504000 SELENOKQ9Y6D0 94 aa11.32□□□□□ -0.6
SNF8-203ENST00000504000 CEP295Q9C0D2 2601 aa11.31□□□□□ -0.6
SNF8-203ENST00000504000 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
SNF8-203ENST00000504000 IGHG2P01859 326 aa11.31□□□□□ -0.6
SNF8-203ENST00000504000 LGALS1P09382 135 aaKnown RBP11.31□□□□□ -0.6
SNF8-203ENST00000504000 RNASE3P12724 160 aaKnown RBP11.31□□□□□ -0.6
SNF8-203ENST00000504000 UBTD1Q9HAC8 227 aa11.31□□□□□ -0.6
SNF8-203ENST00000504000 SPTA1P02549 2419 aa11.31□□□□□ -0.6
SNF8-203ENST00000504000 TMEM238LA0A1B0GVL6 79 aa11.3□□□□□ -0.6
SNF8-203ENST00000504000 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
SNF8-203ENST00000504000 A6NJY4 79 aa11.3□□□□□ -0.6
SNF8-203ENST00000504000 RPL39LQ96EH5 51 aaKnown RBP11.3□□□□□ -0.6
SNF8-203ENST00000504000 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
SNF8-203ENST00000504000 MUC6Q6W4X9 2439 aa11.3□□□□□ -0.6
SNF8-203ENST00000504000 HOXA3O43365 443 aaPredicted RBP11.29□□□□□ -0.6
SNF8-203ENST00000504000 COX6B1P14854 86 aa11.29□□□□□ -0.6
SNF8-203ENST00000504000 TMEM219Q86XT9 240 aa11.29□□□□□ -0.6
SNF8-203ENST00000504000 KLLNB2CW77 178 aa11.29□□□□□ -0.6
SNF8-203ENST00000504000 LINC00315P59091 139 aa11.29□□□□□ -0.6
SNF8-203ENST00000504000 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms