RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 IGHV5-51A0A0C4DH38 117 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.19□□□□□ -2.06
NEDD4-204ENST00000503468 H0Y8X5 98 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 UPK2O00526 184 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 MT-ATP8P03928 68 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 DEFB110Q30KQ9 67 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 Q86TA4 180 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 TMEFF1Q8IYR6 380 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 TMEM167AQ8TBQ9 72 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 A0A087WX48 190 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 TRAV8-1A0A0A6YYK1 113 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 LTAP01374 205 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 CRYGAP11844 174 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 C3AR1Q16581 482 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 LINC01620Q4KN68 170 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 Q8N8P6 123 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 THAP8Q8NA92 274 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 PLEKHB2Q96CS7 222 aa2.19□□□□□ -2.06
NEDD4-204ENST00000503468 MALRD1Q5VYJ5 2156 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 TRBV7-3A0A075B6L6 115 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 NBPF19A0A087WUL8 3843 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 LOC101059948A0A1B0GTJ6 334 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CD7P09564 240 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 B4GALT1P15291 398 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 TNFAIP6P98066 277 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-204ENST00000503468 URB1-AS1Q96HZ7 61 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 VPREB3Q9UKI3 123 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 WNK1Q9H4A3 2382 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 TRBV10-2A0A0K0K1G8 114 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 K7ENP7 123 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CRLF1O75462 422 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 NDUFC2O95298 119 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 TFF1P04155 84 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 LINC00694P0DN24 101 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 PSMB2P49721 201 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 FOXE3Q13461 319 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 PGLYRP4Q96LB8 373 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 DUX5Q96PT3 197 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 SCGB3A1Q96QR1 104 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 U3KQK5 164 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 PCNX1Q96RV3 2341 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 NBASA2RRP1 2371 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 TRAV17A0A0B4J275 112 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 A0A0B4J2C4 111 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 H3BMM0 161 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 COX7CP15954 63 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CA6P23280 308 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 SSR4P51571 173 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 MRPS36P82909 103 aaKnown RBP2.18□□□□□ -2.06
NEDD4-204ENST00000503468 ZNF415Q09FC8 603 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 FHL3Q13643 280 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 MSMPQ1L6U9 139 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 PCP2Q8IVA1 136 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 ZCCHC24Q8N2G6 241 aaKnown RBP2.18□□□□□ -2.06
NEDD4-204ENST00000503468 ABHD12Q8N2K0 398 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 TMEM75Q8N9X5 138 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 UBE2WQ96B02 151 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 RYR3Q15413 4870 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 MED13LQ71F56 2210 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 A0A0J9YW62 118 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 FAM90A27PA6NNH2 459 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 C9JAW5 83 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 M0R381 172 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CFC1BP0CG36 223 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CFC1P0CG37 223 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 FOXC1Q12948 553 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 ATP5EP2Q5VTU8 51 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 PRO0628Q9UI54 55 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 HIGD1AQ9Y241 93 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 SPG11Q96JI7 2443 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 A0A0J9YXY3 114 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CD3EP07766 207 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CECR9P0C854 216 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 RNASE2P10153 161 aaKnown RBP2.18□□□□□ -2.06
NEDD4-204ENST00000503468 CCL8P80075 99 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 HOXA4Q00056 320 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-204ENST00000503468 Q6ZT83 130 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 RNF144BQ7Z419 303 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 FOXC2Q99958 501 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 HHLA3Q9XRX5 114 aa2.18□□□□□ -2.06
NEDD4-204ENST00000503468 TIMM8BQ9Y5J9 83 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-204ENST00000503468 DNAH9Q9NYC9 4486 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.17□□□□□ -2.06
NEDD4-204ENST00000503468 CXCL13O43927 109 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 NXPH3O95157 252 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 TGFAP01135 160 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 PPP1CAP62136 330 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 C1orf61Q13536 156 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 FAM201AQ5SY85 155 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 FAM222AQ5U5X8 452 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 ZNF329Q86UD4 541 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 C3orf22Q8N5N4 141 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 C20orf173Q96LM9 149 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
NEDD4-204ENST00000503468 SLC25A15Q9Y619 301 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 F11RQ9Y624 299 aaKnown RBP2.17□□□□□ -2.06
NEDD4-204ENST00000503468 FN1P02751 2386 aaKnown RBP2.17□□□□□ -2.06
NEDD4-204ENST00000503468 SDHAF1A6NFY7 115 aa2.17□□□□□ -2.06
NEDD4-204ENST00000503468 ZNF815PA8K554 130 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms