RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SRIP30626 198 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 TPPP2P59282 170 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 KRTAP10-9P60411 292 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 BLCAPP62952 87 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 TMEM86BQ8N661 226 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 METTL26Q96S19 204 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 TP53TG1Q9Y2A0 90 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 FAM208BQ5VWN6 2430 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 IGKV2-40A0A087WW87 121 aaPredicted RBP8.89□□□□□ -0.99
USP46-204ENST00000503060 H3BUA1 57 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 IGKV2D-40P01614 121 aaPredicted RBP8.89□□□□□ -0.99
USP46-204ENST00000503060 IGFL4Q6B9Z1 124 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 PGLYRP4Q96LB8 373 aa8.89□□□□□ -0.99
USP46-204ENST00000503060 UBR5O95071 2799 aaPredicted RBP8.89□□□□□ -0.99
USP46-204ENST00000503060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.88□□□□□ -0.993e-6■■■■□ 23.4
USP46-204ENST00000503060 IGHV3-66A0A0C4DH42 116 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 A0A1B0GX51 115 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 CRIP1P50238 77 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 LOXL1Q08397 574 aaPredicted RBP8.88□□□□□ -0.99
USP46-204ENST00000503060 Q6ZS46 218 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 MAPK1IP1LQ8NDC0 245 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 LINC00477Q96M19 166 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 C8orf49Q96NF6 230 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 U3KQE9 123 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 CSMD1Q96PZ7 3565 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 OXTP01178 125 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 APOHP02749 345 aaPredicted RBP8.88□□□□□ -0.99
USP46-204ENST00000503060 HBBP68871 147 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 RPL24P83731 157 aaKnown RBP8.88□□□□□ -0.99
USP46-204ENST00000503060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.88□□□□□ -0.99
USP46-204ENST00000503060 SVEP1Q4LDE5 3571 aa8.87□□□□□ -0.99
USP46-204ENST00000503060 UTP20O75691 2785 aaKnown RBP8.87□□□□□ -0.99
USP46-204ENST00000503060 IGHV3OR16-13A0A075B7E8 117 aa8.87□□□□□ -0.99
USP46-204ENST00000503060 IGHV3-74A0A0B4J1X5 117 aa8.87□□□□□ -0.99
USP46-204ENST00000503060 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
USP46-204ENST00000503060 DEFB112Q30KQ8 113 aa8.87□□□□□ -0.99
USP46-204ENST00000503060 USMG5Q96IX5 58 aa8.87□□□□□ -0.99
USP46-204ENST00000503060 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
USP46-204ENST00000503060 J3QR89 54 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 CT45A10P0DMU9 189 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 EVI2AP22794 236 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 EMP1P54849 157 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 FOXA3P55318 350 aaPredicted RBP8.86□□□□□ -0.99
USP46-204ENST00000503060 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 LCN12Q6JVE5 192 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 COX8CQ7Z4L0 72 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 SLC50A1Q9BRV3 221 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 LRRK2Q5S007 2527 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 IGHV3-49A0A0A0MS15 119 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 ZNF705FA8MVS1 300 aaPredicted RBP8.86□□□□□ -0.99
USP46-204ENST00000503060 PRR25Q96S07 402 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 VGLL1Q99990 258 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 KLK15Q9H2R5 256 aa8.86□□□□□ -0.99
USP46-204ENST00000503060 TRBV12-3P01733 135 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 IGHV4-59P01825 116 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 LEPP41159 167 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 RPS28P62857 69 aaKnown RBP8.85□□□□□ -0.99
USP46-204ENST00000503060 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 IGLV1-40P01703 118 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 CFHR3Q02985 330 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 C18orf32Q8TCD1 76 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 ZNF580Q9UK33 172 aa8.85□□□□□ -0.99
USP46-204ENST00000503060 HAX1O00165 279 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 NDUFA4O00483 81 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 SH2D1AO60880 128 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 IGHV3-11P01762 117 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 IGHV4-31P0DP07 118 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 Q8TAT8 98 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 SAMD10Q9BYL1 202 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 VPS13CQ709C8 3753 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 ANKRD17O75179 2603 aaKnown RBP8.84□□□□□ -0.99
USP46-204ENST00000503060 EPG5Q9HCE0 2579 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 PRAC2D3DTV9 90 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 KLF5Q13887 457 aaPredicted RBP8.84□□□□□ -0.99
USP46-204ENST00000503060 GATD1Q8NB37 220 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 TMEM101Q96IK0 257 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 KCNS1Q96KK3 526 aa8.84□□□□□ -0.99
USP46-204ENST00000503060 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
USP46-204ENST00000503060 FSHBP01225 129 aa8.83□□□□□ -1
USP46-204ENST00000503060 RPL13AP40429 203 aaKnown RBP8.83□□□□□ -1
USP46-204ENST00000503060 PRR31Q5SQ13 230 aa8.83□□□□□ -1
USP46-204ENST00000503060 UNQ9165/PRO28630Q6UXU0 137 aa8.83□□□□□ -1
USP46-204ENST00000503060 LCNL1Q6ZST4 164 aa8.83□□□□□ -1
USP46-204ENST00000503060 Q6ZWC4 215 aa8.83□□□□□ -1
USP46-204ENST00000503060 OR4X2Q8NGF9 303 aa8.83□□□□□ -1
USP46-204ENST00000503060 FBN2P35556 2912 aa8.83□□□□□ -1
USP46-204ENST00000503060 A0A1B0GUT8 65 aa8.83□□□□□ -1
USP46-204ENST00000503060 A0A1W2PS18 150 aa8.83□□□□□ -1
USP46-204ENST00000503060 RBAKDNA6NC62 111 aa8.83□□□□□ -1
USP46-204ENST00000503060 GPX1P07203 203 aa8.83□□□□□ -1
USP46-204ENST00000503060 NTF3P20783 257 aa8.83□□□□□ -1
USP46-204ENST00000503060 C8orf86Q6ZUL3 223 aa8.83□□□□□ -1
USP46-204ENST00000503060 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
USP46-204ENST00000503060 ERCC8Q13216 396 aa8.82□□□□□ -1
USP46-204ENST00000503060 RIGQ13278 110 aa8.82□□□□□ -1
USP46-204ENST00000503060 Q6AWC8 147 aa8.82□□□□□ -1
USP46-204ENST00000503060 SIGLECL1Q8N7X8 197 aa8.82□□□□□ -1
USP46-204ENST00000503060 H3BS24 57 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms