RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TMEM183AQ8IXX5 376 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 ZC2HC1AQ96GY0 325 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 MDFICQ9P1T7 246 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 FABP5P3A8MUU1 101 aa17.78■□□□□ 0.44
LSM6-202ENST00000502781 ZNF415Q09FC8 603 aa17.78■□□□□ 0.44
LSM6-202ENST00000502781 MLST8Q9BVC4 326 aa17.78■□□□□ 0.44
LSM6-202ENST00000502781 KMT2CQ8NEZ4 4911 aaKnown RBP17.77■□□□□ 0.44
LSM6-202ENST00000502781 PLECQ15149 4684 aaKnown RBP17.77■□□□□ 0.44
LSM6-202ENST00000502781 GNRH2O43555 120 aa17.77■□□□□ 0.43
LSM6-202ENST00000502781 SPINK4O60575 86 aa17.77■□□□□ 0.43
LSM6-202ENST00000502781 TYMSP04818 313 aa17.77■□□□□ 0.43
LSM6-202ENST00000502781 RPL35P42766 123 aaKnown RBP17.77■□□□□ 0.43
LSM6-202ENST00000502781 DERL1Q9BUN8 251 aa17.77■□□□□ 0.43
LSM6-202ENST00000502781 SDF2L1Q9HCN8 221 aa17.77■□□□□ 0.43
LSM6-202ENST00000502781 IGHV3-16A0A0C4DH30 117 aa17.76■□□□□ 0.43
LSM6-202ENST00000502781 Q6ZTI0 123 aa17.76■□□□□ 0.43
LSM6-202ENST00000502781 C18orf15Q96N68 181 aa17.76■□□□□ 0.43
LSM6-202ENST00000502781 ZNF674Q2M3X9 581 aa17.75■□□□□ 0.43
LSM6-202ENST00000502781 LGALS9BQ3B8N2 356 aa17.75■□□□□ 0.43
LSM6-202ENST00000502781 BAGE2Q86Y30 109 aa17.75■□□□□ 0.43
LSM6-202ENST00000502781 IGKV3D-20A0A0C4DH25 116 aa17.74■□□□□ 0.43
LSM6-202ENST00000502781 SPXQ9BT56 116 aa17.74■□□□□ 0.43
LSM6-202ENST00000502781 GAGE12BA1L429 117 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 RBFOX3A6NFN3 312 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 GAGE7O76087 117 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 ATP5G1P05496 136 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 GAGE12FP0CL80 117 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 GAGE12GP0CL81 117 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 GAGE12IP0CL82 117 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 TCTAP57738 103 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 ZNF506Q5JVG8 444 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 FAM162BQ5T6X4 162 aa17.73■□□□□ 0.43
LSM6-202ENST00000502781 IGLL5B9A064 214 aa17.72■□□□□ 0.43
LSM6-202ENST00000502781 SH2D1AO60880 128 aa17.72■□□□□ 0.43
LSM6-202ENST00000502781 NHLRC2Q8NBF2 726 aa17.72■□□□□ 0.43
LSM6-202ENST00000502781 MED9Q9NWA0 146 aa17.72■□□□□ 0.43
LSM6-202ENST00000502781 TRGV1A0A0A0MS02 117 aa17.71■□□□□ 0.43
LSM6-202ENST00000502781 FAM210BQ96KR6 192 aa17.71■□□□□ 0.43
LSM6-202ENST00000502781 APLNQ9ULZ1 77 aa17.71■□□□□ 0.43
LSM6-202ENST00000502781 IGHV4-4A0A075B6R2 117 aa17.7■□□□□ 0.42
LSM6-202ENST00000502781 HTN3P15516 51 aa17.7■□□□□ 0.42
LSM6-202ENST00000502781 FAM210AQ96ND0 272 aa17.7■□□□□ 0.42
LSM6-202ENST00000502781 TMEM250H0YL14 139 aa17.69■□□□□ 0.42
LSM6-202ENST00000502781 NDUFS6O75380 124 aaKnown RBP17.69■□□□□ 0.42
LSM6-202ENST00000502781 IGLV2-8P01709 118 aa17.69■□□□□ 0.42
LSM6-202ENST00000502781 CENPWQ5EE01 88 aa17.69■□□□□ 0.42
LSM6-202ENST00000502781 RASL10AQ92737 203 aa17.69■□□□□ 0.42
LSM6-202ENST00000502781 MRPL16Q9NX20 251 aaKnown RBP17.69■□□□□ 0.42
LSM6-202ENST00000502781 TRBV20OR9-2A0A075B6H5 130 aa17.68■□□□□ 0.42
LSM6-202ENST00000502781 LINC01559Q495D7 138 aa17.68■□□□□ 0.42
LSM6-202ENST00000502781 ZNF575Q86XF7 245 aa17.68■□□□□ 0.42
LSM6-202ENST00000502781 PCNPQ8WW12 178 aaKnown RBP17.68■□□□□ 0.42
LSM6-202ENST00000502781 SMIM12Q96EX1 92 aa17.68■□□□□ 0.42
LSM6-202ENST00000502781 C9orf85Q96MD7 179 aa17.68■□□□□ 0.42
LSM6-202ENST00000502781 RAB19A4D1S5 217 aa17.67■□□□□ 0.42
LSM6-202ENST00000502781 KRBOX1C9JBD0 128 aa17.67■□□□□ 0.42
LSM6-202ENST00000502781 ORM1P02763 201 aa17.67■□□□□ 0.42
LSM6-202ENST00000502781 RNASE3P12724 160 aaKnown RBP17.67■□□□□ 0.42
LSM6-202ENST00000502781 TOR2AQ5JU69 321 aa17.67■□□□□ 0.42
LSM6-202ENST00000502781 TRGV2A0A075B6R0 118 aa17.66■□□□□ 0.42
LSM6-202ENST00000502781 LCE6AA0A183 80 aa17.66■□□□□ 0.42
LSM6-202ENST00000502781 M0R2P5 195 aa17.66■□□□□ 0.42
LSM6-202ENST00000502781 DNLZQ5SXM8 178 aa17.66■□□□□ 0.42
LSM6-202ENST00000502781 B4DEV8 164 aa17.66■□□□□ 0.42
LSM6-202ENST00000502781 F5H768 121 aa17.66■□□□□ 0.42
LSM6-202ENST00000502781 MUC4Q99102 2169 aa17.65■□□□□ 0.42
LSM6-202ENST00000502781 GNG4P50150 75 aa17.65■□□□□ 0.42
LSM6-202ENST00000502781 TMEM88Q6PEY1 159 aa17.65■□□□□ 0.42
LSM6-202ENST00000502781 NDUFAF3Q9BU61 184 aa17.65■□□□□ 0.42
LSM6-202ENST00000502781 EIF5A2Q9GZV4 153 aaKnown RBP17.65■□□□□ 0.42
LSM6-202ENST00000502781 SACSQ9NZJ4 4579 aa17.64■□□□□ 0.41
LSM6-202ENST00000502781 M0R036 132 aa17.64■□□□□ 0.41
LSM6-202ENST00000502781 HOXA5P20719 270 aa17.64■□□□□ 0.41
LSM6-202ENST00000502781 PTH2Q96A98 100 aa17.64■□□□□ 0.41
LSM6-202ENST00000502781 DNAH1Q9P2D7 4330 aa17.63■□□□□ 0.41
LSM6-202ENST00000502781 ALMS1Q8TCU4 4167 aa17.63■□□□□ 0.41
LSM6-202ENST00000502781 C9JCJ5 164 aa17.63■□□□□ 0.41
LSM6-202ENST00000502781 ASIPP42127 132 aa17.63■□□□□ 0.41
LSM6-202ENST00000502781 PARLQ9H300 379 aa17.63■□□□□ 0.41
LSM6-202ENST00000502781 LINC00476Q8WZB0 136 aa17.62■□□□□ 0.41
LSM6-202ENST00000502781 IL36BQ9NZH7 164 aa17.62■□□□□ 0.41
LSM6-202ENST00000502781 LYSTQ99698 3801 aa17.62■□□□□ 0.41
LSM6-202ENST00000502781 PRR27Q6MZM9 219 aa17.61■□□□□ 0.41
LSM6-202ENST00000502781 POM121L12Q8N7R1 296 aa17.61■□□□□ 0.41
LSM6-202ENST00000502781 PGPEP1LA6NFU8 196 aa17.6■□□□□ 0.41
LSM6-202ENST00000502781 CXCL1P09341 107 aa17.6■□□□□ 0.41
LSM6-202ENST00000502781 S100A4P26447 101 aaKnown RBP17.6■□□□□ 0.41
LSM6-202ENST00000502781 C19orf71A6NCJ1 209 aa17.59■□□□□ 0.41
LSM6-202ENST00000502781 SRP19P09132 144 aaKnown RBP17.59■□□□□ 0.41
LSM6-202ENST00000502781 ZNF876PQ49A33 203 aa17.59■□□□□ 0.41
LSM6-202ENST00000502781 LGALS9CQ6DKI2 356 aa17.59■□□□□ 0.41
LSM6-202ENST00000502781 SCRT2Q9NQ03 307 aa17.59■□□□□ 0.41
LSM6-202ENST00000502781 GRIFINA4D1Z8 144 aa17.58■□□□□ 0.4
LSM6-202ENST00000502781 MGST1P10620 155 aaKnown RBP17.58■□□□□ 0.4
LSM6-202ENST00000502781 OR5I1Q13606 314 aa17.58■□□□□ 0.4
LSM6-202ENST00000502781 PIK3CD-AS1Q5SR53 167 aa17.58■□□□□ 0.4
LSM6-202ENST00000502781 C15orf53Q8NAA6 179 aa17.58■□□□□ 0.4
LSM6-202ENST00000502781 TMSB15BA0A087X1C1 80 aa17.57■□□□□ 0.4
LSM6-202ENST00000502781 TRAV4A0A0B4J268 109 aa17.57■□□□□ 0.4
LSM6-202ENST00000502781 H3BVH4 76 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms