RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TRAV6A0A075B6T7 132 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 DIRC3C9JPN6 131 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 OR7C2O60412 319 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 TYMSP04818 313 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 PFN1P07737 140 aaKnown RBP9.71□□□□□ -0.86
TRAF4-212ENST00000498540 IL7P13232 177 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
TRAF4-212ENST00000498540 LAGE3Q14657 143 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 CNPY1Q3B7I2 92 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 LINC01620Q4KN68 170 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 LELP1Q5T871 98 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 SCXQ7RTU7 201 aa9.71□□□□□ -0.86
TRAF4-212ENST00000498540 FBLL1A6NHQ2 334 aaKnown RBP9.7□□□□□ -0.86
TRAF4-212ENST00000498540 PLA2G10O15496 165 aa9.7□□□□□ -0.86
TRAF4-212ENST00000498540 NHLH2Q02577 135 aa9.7□□□□□ -0.86
TRAF4-212ENST00000498540 OR5C1Q8NGR4 320 aa9.7□□□□□ -0.86
TRAF4-212ENST00000498540 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
TRAF4-212ENST00000498540 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
TRAF4-212ENST00000498540 TCRBP04435 133 aa9.69□□□□□ -0.86
TRAF4-212ENST00000498540 UBE2L3P68036 154 aaKnown RBP9.69□□□□□ -0.86
TRAF4-212ENST00000498540 RBM38Q9H0Z9 239 aaKnown RBP9.69□□□□□ -0.86
TRAF4-212ENST00000498540 NUDT15Q9NV35 164 aa9.69□□□□□ -0.86
TRAF4-212ENST00000498540 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
TRAF4-212ENST00000498540 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 F6UZH7 168 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 LYRM1O43325 122 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 RHOHQ15669 191 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 CFAP126Q5VTH2 177 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 DPPA3Q6W0C5 159 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 TMED6Q8WW62 240 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 HYLS1Q96M11 299 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 PRADC1Q9BSG0 188 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 RPH3ALQ9UNE2 315 aa9.68□□□□□ -0.86
TRAF4-212ENST00000498540 TRAV21A0A0B4J279 112 aa9.67□□□□□ -0.86
TRAF4-212ENST00000498540 TRBV6-4A0A1B0GX49 114 aa9.67□□□□□ -0.86
TRAF4-212ENST00000498540 TVP23CQ96ET8 276 aa9.67□□□□□ -0.86
TRAF4-212ENST00000498540 WDR61Q9GZS3 305 aaKnown RBP9.67□□□□□ -0.86
TRAF4-212ENST00000498540 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
TRAF4-212ENST00000498540 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
TRAF4-212ENST00000498540 KCNIP2Q9NS61 270 aa9.67□□□□□ -0.86
TRAF4-212ENST00000498540 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
TRAF4-212ENST00000498540 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
TRAF4-212ENST00000498540 RS1O15537 224 aa9.66□□□□□ -0.86
TRAF4-212ENST00000498540 EIF3GO75821 320 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRAF4-212ENST00000498540 OXTP01178 125 aa9.66□□□□□ -0.86
TRAF4-212ENST00000498540 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
TRAF4-212ENST00000498540 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
TRAF4-212ENST00000498540 BAALCQ8WXS3 180 aa9.66□□□□□ -0.86
TRAF4-212ENST00000498540 TRAV8-1A0A0A6YYK1 113 aa9.65□□□□□ -0.86
TRAF4-212ENST00000498540 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
TRAF4-212ENST00000498540 DAZ4Q86SG3 579 aaKnown RBP9.65□□□□□ -0.86
TRAF4-212ENST00000498540 ASB13Q8WXK3 278 aa9.65□□□□□ -0.86
TRAF4-212ENST00000498540 ATP5SQ99766 215 aa9.65□□□□□ -0.86
TRAF4-212ENST00000498540 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
TRAF4-212ENST00000498540 DAZ3Q9NR90 486 aaKnown RBP9.65□□□□□ -0.86
TRAF4-212ENST00000498540 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 PGPA6NDG6 321 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 KHDC3LQ587J8 217 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 CIRBP-AS1Q8TBR5 109 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 KCNS1Q96KK3 526 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 TREM1Q9NP99 234 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 OTORQ9NRC9 128 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 OR5AC2Q9NZP5 309 aa9.64□□□□□ -0.87
TRAF4-212ENST00000498540 H2AFB2P0C5Z0 115 aa9.63□□□□□ -0.87
TRAF4-212ENST00000498540 FFAR4Q5NUL3 377 aa9.63□□□□□ -0.87
TRAF4-212ENST00000498540 CMTM2Q8TAZ6 248 aa9.63□□□□□ -0.87
TRAF4-212ENST00000498540 NMES1Q9C002 83 aa9.63□□□□□ -0.87
TRAF4-212ENST00000498540 C11orf21Q9P2W6 132 aa9.63□□□□□ -0.87
TRAF4-212ENST00000498540 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 PGPEP1LA6NFU8 196 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 C17orf112F2Z3M2 114 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 CIDEAO60543 219 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 SIX6O95475 246 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 LINC00694P0DN24 101 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 MGST1P10620 155 aaKnown RBP9.62□□□□□ -0.87
TRAF4-212ENST00000498540 GNG5P63218 68 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 MBD2Q9UBB5 411 aa9.62□□□□□ -0.87
TRAF4-212ENST00000498540 H0YIZ8 118 aa9.61□□□□□ -0.87
TRAF4-212ENST00000498540 ZNF80P51504 273 aaPredicted RBP9.61□□□□□ -0.87
TRAF4-212ENST00000498540 TAS2R45P59539 299 aa9.61□□□□□ -0.87
TRAF4-212ENST00000498540 LRRC37A5PQ49AS3 106 aa9.61□□□□□ -0.87
TRAF4-212ENST00000498540 TMEM75Q8N9X5 138 aa9.61□□□□□ -0.87
TRAF4-212ENST00000498540 SGK494Q96LW2 274 aa9.61□□□□□ -0.87
TRAF4-212ENST00000498540 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 GGTLC3B5MD39 225 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 GAGE1Q13065 139 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 GAGE4Q13068 117 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 GAGE5Q13069 117 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 ASAH1Q13510 395 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 TOR2AQ5JU69 321 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 FAM74A1Q5RGS3 127 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 Q9UF83 564 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
TRAF4-212ENST00000498540 RNF222A6NCQ9 220 aa9.59□□□□□ -0.87
TRAF4-212ENST00000498540 RNASE3P12724 160 aaKnown RBP9.59□□□□□ -0.87
TRAF4-212ENST00000498540 Q8N976 141 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms