RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 HSPB11Q9Y547 144 aa17.12■□□□□ 0.33
MKRN1-216ENST00000498535 SRRM2Q9UQ35 2752 aaKnown RBP17.11■□□□□ 0.33
MKRN1-216ENST00000498535 TRAV21A0A0B4J279 112 aa17.11■□□□□ 0.33
MKRN1-216ENST00000498535 PSCAO43653 123 aa17.11■□□□□ 0.33
MKRN1-216ENST00000498535 PET100P0DJ07 73 aa17.11■□□□□ 0.33
MKRN1-216ENST00000498535 IGHV3-16A0A0C4DH30 117 aa17.1■□□□□ 0.33
MKRN1-216ENST00000498535 PPT1P50897 306 aa17.1■□□□□ 0.33
MKRN1-216ENST00000498535 H2BFSP57053 126 aa17.1■□□□□ 0.33
MKRN1-216ENST00000498535 GOLT1AQ6ZVE7 132 aa17.1■□□□□ 0.33
MKRN1-216ENST00000498535 SMIM3Q9BZL3 60 aa17.1■□□□□ 0.33
MKRN1-216ENST00000498535 SDF2L1Q9HCN8 221 aa17.1■□□□□ 0.33
MKRN1-216ENST00000498535 IGHV3-38A0A0C4DH36 116 aa17.09■□□□□ 0.33
MKRN1-216ENST00000498535 LOC100131303A0A0U1RQF7 123 aa17.09■□□□□ 0.33
MKRN1-216ENST00000498535 INMT-MINDY4F8WBC2 141 aa17.09■□□□□ 0.33
MKRN1-216ENST00000498535 KCNS1Q96KK3 526 aa17.09■□□□□ 0.33
MKRN1-216ENST00000498535 TREM1Q9NP99 234 aa17.09■□□□□ 0.33
MKRN1-216ENST00000498535 A0A1W2PPV4 95 aa17.08■□□□□ 0.32
MKRN1-216ENST00000498535 RPL12P30050 165 aaKnown RBP17.08■□□□□ 0.32
MKRN1-216ENST00000498535 TIRAPP58753 221 aa17.08■□□□□ 0.32
MKRN1-216ENST00000498535 PQLC2Q6ZP29 291 aa17.08■□□□□ 0.32
MKRN1-216ENST00000498535 ARL6IP6Q8N6S5 226 aa17.08■□□□□ 0.32
MKRN1-216ENST00000498535 EIF3GO75821 320 aaKnown RBP eCLIP17.07■□□□□ 0.32
MKRN1-216ENST00000498535 MPC2O95563 127 aa17.07■□□□□ 0.32
MKRN1-216ENST00000498535 TYMSP04818 313 aa17.07■□□□□ 0.32
MKRN1-216ENST00000498535 ACOT6Q3I5F7 207 aaPredicted RBP17.07■□□□□ 0.32
MKRN1-216ENST00000498535 BOLA1Q9Y3E2 137 aa17.07■□□□□ 0.32
MKRN1-216ENST00000498535 F6UZH7 168 aa17.06■□□□□ 0.32
MKRN1-216ENST00000498535 SSNA1O43805 119 aa17.06■□□□□ 0.32
MKRN1-216ENST00000498535 PFN1P07737 140 aaKnown RBP17.06■□□□□ 0.32
MKRN1-216ENST00000498535 GATA1P15976 413 aaPredicted RBP17.06■□□□□ 0.32
MKRN1-216ENST00000498535 IFITM3Q01628 133 aa17.06■□□□□ 0.32
MKRN1-216ENST00000498535 ASB13Q8WXK3 278 aa17.06■□□□□ 0.32
MKRN1-216ENST00000498535 IGLV5-52A0A0A0MRZ9 124 aa17.05■□□□□ 0.32
MKRN1-216ENST00000498535 TRAV8-1A0A0A6YYK1 113 aa17.05■□□□□ 0.32
MKRN1-216ENST00000498535 TRAV8-6A0A0B4J262 113 aa17.05■□□□□ 0.32
MKRN1-216ENST00000498535 FBLL1A6NHQ2 334 aaKnown RBP17.05■□□□□ 0.32
MKRN1-216ENST00000498535 SMR3BP02814 79 aaPredicted RBP17.05■□□□□ 0.32
MKRN1-216ENST00000498535 LINC01556Q5JQF7 62 aa17.04■□□□□ 0.32
MKRN1-216ENST00000498535 TVP23CQ96ET8 276 aa17.04■□□□□ 0.32
MKRN1-216ENST00000498535 PRADC1Q9BSG0 188 aa17.04■□□□□ 0.32
MKRN1-216ENST00000498535 NDFIP1Q9BT67 221 aa17.04■□□□□ 0.32
MKRN1-216ENST00000498535 FAT1Q14517 4588 aa17.03■□□□□ 0.32
MKRN1-216ENST00000498535 FAM229AH3BQW9 127 aa17.03■□□□□ 0.32
MKRN1-216ENST00000498535 DEFA1P59665 94 aa17.03■□□□□ 0.32
MKRN1-216ENST00000498535 DEFA3P59666 94 aa17.03■□□□□ 0.32
MKRN1-216ENST00000498535 NTN5Q8WTR8 489 aaPredicted RBP17.03■□□□□ 0.32
MKRN1-216ENST00000498535 ZNF876PQ49A33 203 aa17.02■□□□□ 0.32
MKRN1-216ENST00000498535 OR10J3Q5JRS4 329 aa17.02■□□□□ 0.32
MKRN1-216ENST00000498535 MARVELD1Q9BSK0 173 aa17.02■□□□□ 0.32
MKRN1-216ENST00000498535 FLG2Q5D862 2391 aaPredicted RBP17.01■□□□□ 0.31
MKRN1-216ENST00000498535 IBA57-AS1B1ANH7 110 aa17.01■□□□□ 0.31
MKRN1-216ENST00000498535 CIDEAO60543 219 aa17.01■□□□□ 0.31
MKRN1-216ENST00000498535 GNG5P63218 68 aa17.01■□□□□ 0.31
MKRN1-216ENST00000498535 SLC25A29Q8N8R3 303 aa17.01■□□□□ 0.31
MKRN1-216ENST00000498535 VPS13BQ7Z7G8 4022 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 LRCOL1A6NCL2 159 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 HMGB3O15347 200 aaKnown RBP17■□□□□ 0.31
MKRN1-216ENST00000498535 RAB2AP61019 212 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 RHOHQ15669 191 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 OR10G9Q8NGN4 311 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 OR10G7Q8NGN6 311 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 TMEM70Q9BUB7 260 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 Q9HAA7 133 aa17■□□□□ 0.31
MKRN1-216ENST00000498535 SERTM2A0A1B0GWG4 89 aa16.99■□□□□ 0.31
MKRN1-216ENST00000498535 TRBV6-4A0A1B0GX49 114 aa16.99■□□□□ 0.31
MKRN1-216ENST00000498535 SGK494Q96LW2 274 aa16.99■□□□□ 0.31
MKRN1-216ENST00000498535 WFDC1Q9HC57 220 aa16.99■□□□□ 0.31
MKRN1-216ENST00000498535 K7EQM0 130 aa16.98■□□□□ 0.31
MKRN1-216ENST00000498535 RS1O15537 224 aa16.98■□□□□ 0.31
MKRN1-216ENST00000498535 CFAP126Q5VTH2 177 aa16.98■□□□□ 0.31
MKRN1-216ENST00000498535 TAAR5O14804 337 aa16.97■□□□□ 0.31
MKRN1-216ENST00000498535 HAMPP81172 84 aa16.97■□□□□ 0.31
MKRN1-216ENST00000498535 IGHV3-73A0A0B4J1V6 119 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 IGHV3-30P01768 117 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 IGHV3-33P01772 117 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 ARL14EPLP0DKL9 152 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 IGHV3-30-3P0DP02 117 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 IGHV3-30-5P0DP03 117 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 LELP1Q5T871 98 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 Q8N814 137 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 MYCBP2O75592 4640 aa16.96■□□□□ 0.31
MKRN1-216ENST00000498535 GCGP01275 180 aa16.95■□□□□ 0.3
MKRN1-216ENST00000498535 CDC34P49427 236 aaPredicted RBP16.95■□□□□ 0.3
MKRN1-216ENST00000498535 ZFP69Q49AA0 526 aa16.95■□□□□ 0.3
MKRN1-216ENST00000498535 Q6ZSN1 163 aa16.95■□□□□ 0.3
MKRN1-216ENST00000498535 C5orf17Q8NAS9 161 aa16.95■□□□□ 0.3
MKRN1-216ENST00000498535 GTSF1LQ9H1H1 148 aa16.95■□□□□ 0.3
MKRN1-216ENST00000498535 TCRAP04437 139 aa16.94■□□□□ 0.3
MKRN1-216ENST00000498535 ZNF80P51504 273 aaPredicted RBP16.94■□□□□ 0.3
MKRN1-216ENST00000498535 DPPA3Q6W0C5 159 aa16.94■□□□□ 0.3
MKRN1-216ENST00000498535 ATP6V0E2Q8NHE4 81 aa16.94■□□□□ 0.3
MKRN1-216ENST00000498535 C11orf21Q9P2W6 132 aa16.94■□□□□ 0.3
MKRN1-216ENST00000498535 MGST1P10620 155 aaKnown RBP16.93■□□□□ 0.3
MKRN1-216ENST00000498535 C9orf85Q96MD7 179 aa16.93■□□□□ 0.3
MKRN1-216ENST00000498535 TM2D2Q9BX73 214 aa16.93■□□□□ 0.3
MKRN1-216ENST00000498535 PSG8Q9UQ74 426 aa16.93■□□□□ 0.3
MKRN1-216ENST00000498535 STAG3L2P0CL84 134 aa16.92■□□□□ 0.3
MKRN1-216ENST00000498535 STAG3L3P0CL85 134 aa16.92■□□□□ 0.3
MKRN1-216ENST00000498535 SMUG1Q53HV7 270 aa16.92■□□□□ 0.3
MKRN1-216ENST00000498535 ZNF506Q5JVG8 444 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms