RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 LINC00477Q96M19 166 aa10.83□□□□□ -0.68
MUC1-220ENST00000498431 TRAV9-2A0A087WT02 112 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
MUC1-220ENST00000498431 A0A1W2PPV4 95 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 K7EQD1 137 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
MUC1-220ENST00000498431 GPX1P07203 203 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 SFTA3P0C7M3 94 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 CRISP2P16562 243 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 FAM122CQ6P4D5 195 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 EXOC3-AS1Q8N2X6 119 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 BOLA1Q9Y3E2 137 aa10.82□□□□□ -0.68
MUC1-220ENST00000498431 IGHV1OR15-1A0A075B7D0 117 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 RGS13O14921 159 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 PYYP10082 97 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 TAS2R45P59539 299 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 SLAQ13239 276 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 MIR17HGQ75NE6 70 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 BLNKQ8WV28 456 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 TMED6Q8WW62 240 aa10.81□□□□□ -0.68
MUC1-220ENST00000498431 ACTR3CQ9C0K3 210 aaPredicted RBP10.81□□□□□ -0.68
MUC1-220ENST00000498431 UMAD1C9J7I0 102 aa10.8□□□□□ -0.68
MUC1-220ENST00000498431 EVI2AP22794 236 aa10.8□□□□□ -0.68
MUC1-220ENST00000498431 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
MUC1-220ENST00000498431 C9orf47Q6ZRZ4 202 aa10.8□□□□□ -0.68
MUC1-220ENST00000498431 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
MUC1-220ENST00000498431 SLC25A2Q9BXI2 301 aa10.8□□□□□ -0.68
MUC1-220ENST00000498431 TMEM14CQ9P0S9 112 aa10.8□□□□□ -0.68
MUC1-220ENST00000498431 IGLV5-52A0A0A0MRZ9 124 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 TRGV4A0A0C4DH28 118 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 LRCOL1A6NCL2 159 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 J3QL48 77 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 HIST1H1EP10412 219 aaKnown RBP10.79□□□□□ -0.68
MUC1-220ENST00000498431 GYPEP15421 78 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 SRIP30626 198 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 KHDC3LQ587J8 217 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 RAB24Q969Q5 203 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 FAM167A-AS1Q96KT0 104 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 FAM30AQ9NZY2 134 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 PRELID1Q9Y255 219 aa10.79□□□□□ -0.68
MUC1-220ENST00000498431 CRYGDP07320 174 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 NMBP08949 121 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 PDE6HQ13956 83 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 DPPA3Q6W0C5 159 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 Q8TAT8 98 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 PHYHIPLQ96FC7 376 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 PAXXQ9BUH6 204 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 OR51M1Q9H341 326 aa10.78□□□□□ -0.68
MUC1-220ENST00000498431 HMCN2Q8NDA2 5059 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 CTXND1A0A1B0GTU2 59 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 K7EP13 123 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 OR7C2O60412 319 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 RAB5CP51148 216 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 ZNF415Q09FC8 603 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 MUC21Q5SSG8 566 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 TMEM78Q5T7P6 136 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 PQLC2Q6ZP29 291 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 ZNF492Q9P255 531 aa10.77□□□□□ -0.69
MUC1-220ENST00000498431 LRP1Q07954 4544 aaKnown RBP10.77□□□□□ -0.69
MUC1-220ENST00000498431 LOC100131303A0A0U1RQF7 123 aa10.76□□□□□ -0.69
MUC1-220ENST00000498431 HMGB3O15347 200 aaKnown RBP10.76□□□□□ -0.69
MUC1-220ENST00000498431 SULT1A2P50226 295 aa10.76□□□□□ -0.69
MUC1-220ENST00000498431 IQCF2Q8IXL9 164 aa10.76□□□□□ -0.69
MUC1-220ENST00000498431 FAM213BQ8TBF2 198 aa10.76□□□□□ -0.69
MUC1-220ENST00000498431 EIF3GO75821 320 aaKnown RBP eCLIP10.75□□□□□ -0.69
MUC1-220ENST00000498431 STAG3L2P0CL84 134 aa10.75□□□□□ -0.69
MUC1-220ENST00000498431 STAG3L3P0CL85 134 aa10.75□□□□□ -0.69
MUC1-220ENST00000498431 ZNF726P1Q15940 193 aa10.75□□□□□ -0.69
MUC1-220ENST00000498431 PCNPQ8WW12 178 aaKnown RBP10.75□□□□□ -0.69
MUC1-220ENST00000498431 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
MUC1-220ENST00000498431 PSCAO43653 123 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 CXorf1O96002 111 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 OR10J4P0C629 311 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 NBEAP1P0C6P0 100 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 ARL14EPLP0DKL9 152 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 FHITP49789 147 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 ZNF138P52744 262 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 UBE2L3P68036 154 aaKnown RBP10.74□□□□□ -0.69
MUC1-220ENST00000498431 ALKAL2Q6UX46 152 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 C10orf126Q8N4M7 172 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 NTN5Q8WTR8 489 aaPredicted RBP10.74□□□□□ -0.69
MUC1-220ENST00000498431 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
MUC1-220ENST00000498431 MAP1LC3B2A6NCE7 125 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 ORM1P02763 201 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 GCHFRP30047 84 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 FAM74A1Q5RGS3 127 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 Q8N814 137 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 RASL10AQ92737 203 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 MAP1LC3BQ9GZQ8 125 aa10.73□□□□□ -0.69
MUC1-220ENST00000498431 UBR4Q5T4S7 5183 aa10.72□□□□□ -0.69
MUC1-220ENST00000498431 H2AFB1P0C5Y9 115 aa10.72□□□□□ -0.69
MUC1-220ENST00000498431 TMEM183BQ1AE95 376 aa10.72□□□□□ -0.69
MUC1-220ENST00000498431 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
MUC1-220ENST00000498431 SFT2D1Q8WV19 159 aa10.72□□□□□ -0.69
MUC1-220ENST00000498431 FAT3Q8TDW7 4589 aa10.72□□□□□ -0.69
MUC1-220ENST00000498431 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.69
MUC1-220ENST00000498431 C9JCJ5 164 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms