RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 LYG2Q86SG7 212 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 CIB3Q96Q77 187 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 SLC25A39Q9BZJ4 359 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 C11orf1Q9H5F2 150 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 ENY2Q9NPA8 101 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 IGKV1D-37A0A075B6S9 117 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 TRAV14DV4A0A0A6YYC5 116 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 SMIM9A6NGZ8 99 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 K7EPK0 472 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 LYRM1O43325 122 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 MED6O75586 246 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 SERF1AO75920 110 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 OPRK1P41145 380 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 TAS2R30P59541 319 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 RNASE11Q8TAA1 199 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 MUC7Q8TAX7 377 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 RXFP4Q8TDU9 374 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 DCANP1Q8TF63 244 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 TRGV9Q99603 122 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 RHPN1-AS1Q9BWJ2 59 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 GGTLC1Q9BX51 225 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 WFDC10AQ9H1F0 79 aa4.16□□□□□ -1.74
TMEM39A-212ENST00000497993 IGKV1OR2-108A0A075B7D4 117 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 SMIM26A0A096LP01 95 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 LOC102724200A0A096LPH7 203 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 IGHV3-21A0A0B4J1V1 117 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 CEBPZOSA8MTT3 80 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 SYNGR2O43760 224 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 CFDP00746 253 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 IGLV2-11P01706 119 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 IL5P05113 134 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 OR10J1P30954 320 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 ZNF846Q147U1 533 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 PMVKQ15126 192 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 GUCA2BQ16661 112 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 SPINK9Q5DT21 86 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 C1orf194Q5T5A4 169 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 C1orf195Q5TG92 126 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 TMEM14EPQ6UXP3 125 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 SLC51BQ86UW2 128 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 DEFB125Q8N687 156 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 BTF3L4Q96K17 158 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 SCRT2Q9NQ03 307 aa4.15□□□□□ -1.75
TMEM39A-212ENST00000497993 ALMS1Q8TCU4 4167 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 A0A1B0GV72 72 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 A8MTW9 85 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 GIPP09681 153 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 LINC00614P0C842 121 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 M6PRP20645 277 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 NPPCP23582 126 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 INPP1P49441 399 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 REG3AQ06141 175 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 TMEM97Q5BJF2 176 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 TMEM144Q7Z5S9 345 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 COQ8AQ8NI60 647 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 Q8WTZ3 238 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 SMIM8Q96KF7 97 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 SLC25A31Q9H0C2 315 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 C11orf68Q9H3H3 251 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 TUBA4BQ9H853 241 aa4.14□□□□□ -1.75
TMEM39A-212ENST00000497993 MUC4Q99102 2169 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 PLECQ15149 4684 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 TGIF2-C20orf24A0A0A6YYL0 155 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 A0A1B0GXF2 115 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 EPM2AB3EWF7 344 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 IFNA10P01566 189 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 EIF2B2P49770 351 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 RPL36AP83881 106 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 C6orf99Q4VX62 202 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 SAMD13Q5VXD3 122 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 TCF24Q7RTU0 167 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 ZNF431Q8TF32 576 aaPredicted RBP4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 RPUSD4Q96CM3 377 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 SLC35E1Q96K37 410 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 LITAFQ99732 161 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 GGACTQ9BVM4 153 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 DNAH6Q9C0G6 4158 aa4.13□□□□□ -1.75
TMEM39A-212ENST00000497993 IGHV3OR16-8A0A075B7F1 116 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 PGPA6NDG6 321 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 ZNF207O43670 478 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 IFNA21P01568 189 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 AMBPP02760 352 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 IL4P05112 153 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 GIG44P09565 113 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 FMC1Q96HJ9 113 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 NARS2Q96I59 477 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 VSIG2Q96IQ7 327 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 OPRPNQ99935 248 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 MARVELD1Q9BSK0 173 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 RABAC1Q9UI14 185 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 RYR3Q15413 4870 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 RYR2Q92736 4967 aa4.12□□□□□ -1.75
TMEM39A-212ENST00000497993 A0A0J9YXY3 114 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 C7orf66A4D0T2 115 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 SNRPGP15A8MWD9 76 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 H3BRN7 92 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 HMGB3O15347 200 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 PFDN1O60925 122 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms