RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 PET100P0DJ07 73 aa12.3□□□□□ -0.44
ATPAF2-209ENST00000497871 RPL12P30050 165 aaKnown RBP12.3□□□□□ -0.44
ATPAF2-209ENST00000497871 TIRAPP58753 221 aa12.3□□□□□ -0.44
ATPAF2-209ENST00000497871 SMIM3Q9BZL3 60 aa12.3□□□□□ -0.44
ATPAF2-209ENST00000497871 GCSHP23434 173 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 IFITM3Q01628 133 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 PQLC2Q6ZP29 291 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 GOLT1AQ6ZVE7 132 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 FRZBQ92765 325 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 KCNS1Q96KK3 526 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 MARVELD1Q9BSK0 173 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
ATPAF2-209ENST00000497871 A0A1W2PPV4 95 aa12.28□□□□□ -0.44
ATPAF2-209ENST00000497871 EIF3GO75821 320 aaKnown RBP eCLIP12.28□□□□□ -0.44
ATPAF2-209ENST00000497871 TYMSP04818 313 aa12.28□□□□□ -0.44
ATPAF2-209ENST00000497871 ACOT6Q3I5F7 207 aaPredicted RBP12.28□□□□□ -0.44
ATPAF2-209ENST00000497871 TVP23CQ96ET8 276 aa12.28□□□□□ -0.44
ATPAF2-209ENST00000497871 SDF2L1Q9HCN8 221 aa12.28□□□□□ -0.44
ATPAF2-209ENST00000497871 IGHV3-38A0A0C4DH36 116 aa12.27□□□□□ -0.45
ATPAF2-209ENST00000497871 LOC100131303A0A0U1RQF7 123 aa12.27□□□□□ -0.45
ATPAF2-209ENST00000497871 SSNA1O43805 119 aa12.27□□□□□ -0.45
ATPAF2-209ENST00000497871 GATA1P15976 413 aaPredicted RBP12.27□□□□□ -0.45
ATPAF2-209ENST00000497871 Q5VSD8 79 aa12.27□□□□□ -0.45
ATPAF2-209ENST00000497871 NHLRC2Q8NBF2 726 aa12.27□□□□□ -0.45
ATPAF2-209ENST00000497871 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
ATPAF2-209ENST00000497871 TRAV8-1A0A0A6YYK1 113 aa12.26□□□□□ -0.45
ATPAF2-209ENST00000497871 CIDEAO60543 219 aa12.26□□□□□ -0.45
ATPAF2-209ENST00000497871 PFN1P07737 140 aaKnown RBP12.26□□□□□ -0.45
ATPAF2-209ENST00000497871 WFDC1Q9HC57 220 aa12.26□□□□□ -0.45
ATPAF2-209ENST00000497871 F6UZH7 168 aa12.25□□□□□ -0.45
ATPAF2-209ENST00000497871 PPT1P50897 306 aa12.25□□□□□ -0.45
ATPAF2-209ENST00000497871 LINC01556Q5JQF7 62 aa12.25□□□□□ -0.45
ATPAF2-209ENST00000497871 ASB13Q8WXK3 278 aa12.25□□□□□ -0.45
ATPAF2-209ENST00000497871 LRCOL1A6NCL2 159 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 FBLL1A6NHQ2 334 aaKnown RBP12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 IBA57-AS1B1ANH7 110 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 PSCAO43653 123 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 RAB2AP61019 212 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 OR10G9Q8NGN4 311 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 OR10G7Q8NGN6 311 aa12.24□□□□□ -0.45
ATPAF2-209ENST00000497871 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
ATPAF2-209ENST00000497871 SERTM2A0A1B0GWG4 89 aa12.23□□□□□ -0.45
ATPAF2-209ENST00000497871 GNG5P63218 68 aa12.23□□□□□ -0.45
ATPAF2-209ENST00000497871 NTN5Q8WTR8 489 aaPredicted RBP12.23□□□□□ -0.45
ATPAF2-209ENST00000497871 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
ATPAF2-209ENST00000497871 NDFIP1Q9BT67 221 aa12.23□□□□□ -0.45
ATPAF2-209ENST00000497871 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
ATPAF2-209ENST00000497871 IGLV5-52A0A0A0MRZ9 124 aa12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 TRBV6-4A0A1B0GX49 114 aa12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 TAAR5O14804 337 aa12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 HMGB3O15347 200 aaKnown RBP12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 RS1O15537 224 aa12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 SGK494Q96LW2 274 aa12.22□□□□□ -0.45
ATPAF2-209ENST00000497871 VPS13BQ7Z7G8 4022 aa12.21□□□□□ -0.45
ATPAF2-209ENST00000497871 RHOHQ15669 191 aa12.21□□□□□ -0.45
ATPAF2-209ENST00000497871 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.45
ATPAF2-209ENST00000497871 FAM229AH3BQW9 127 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 TCRAP04437 139 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 ARL14EPLP0DKL9 152 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 DEFA1P59665 94 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 DEFA3P59666 94 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 LELP1Q5T871 98 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 C5orf17Q8NAS9 161 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 SUN5Q8TC36 379 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 PTH2Q96A98 100 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 TMEM70Q9BUB7 260 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
ATPAF2-209ENST00000497871 K7EQM0 130 aa12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 STAG3L2P0CL84 134 aa12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 STAG3L3P0CL85 134 aa12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 CDC34P49427 236 aaPredicted RBP12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 Q8N814 137 aa12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 C9orf85Q96MD7 179 aa12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 PSG8Q9UQ74 426 aa12.19□□□□□ -0.46
ATPAF2-209ENST00000497871 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
ATPAF2-209ENST00000497871 GCGP01275 180 aa12.18□□□□□ -0.46
ATPAF2-209ENST00000497871 Q9HAA7 133 aa12.18□□□□□ -0.46
ATPAF2-209ENST00000497871 MYCBP2O75592 4640 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 PGPEP1LA6NFU8 196 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 IGHV3-30P01768 117 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 IGHV3-30-3P0DP02 117 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 IGHV3-30-5P0DP03 117 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 MGST1P10620 155 aaKnown RBP12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 ATP6V0E2Q8NHE4 81 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 RAB24Q969Q5 203 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 GTSF1LQ9H1H1 148 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 DNAH8Q96JB1 4490 aa12.17□□□□□ -0.46
ATPAF2-209ENST00000497871 GCHFRP30047 84 aa12.16□□□□□ -0.46
ATPAF2-209ENST00000497871 SUMO1P63165 101 aaKnown RBP12.16□□□□□ -0.46
ATPAF2-209ENST00000497871 FLI1Q01543 452 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms