RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.79
GAPVD1-220ENST00000497580 LYPD1Q8N2G4 141 aa10.15□□□□□ -0.79
GAPVD1-220ENST00000497580 TMEM155Q4W5P6 130 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 RNF182Q8N6D2 247 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 CFHR4Q92496 578 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 TEX22C9J3V5 150 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 TMEM262E9PQX1 116 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 SLC25A20O43772 301 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 Q6ZQT7 251 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 IL17RELQ6ZVW7 336 aa10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 C1orf162Q8NEQ5 155 aaPredicted RBP10.14□□□□□ -0.79
GAPVD1-220ENST00000497580 IGHV4-39P01824 125 aa10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 CRIP2P52943 208 aaPredicted RBP10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 C22orf34Q6ZV56 151 aa10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 NTN5Q8WTR8 489 aaPredicted RBP10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 IGHV3-49A0A0A0MS15 119 aa10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 K7EIM0 57 aa10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 IFITM1P13164 125 aa10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 DEFB123Q8N688 67 aa10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 DEFB124Q8NES8 71 aa10.13□□□□□ -0.79
GAPVD1-220ENST00000497580 PRAC2D3DTV9 90 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 MGPP08493 103 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 DYNAPQ8N1N2 210 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 M0R381 172 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 FCN3O75636 299 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 HES1Q14469 280 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 TMEM30BQ3MIR4 351 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 SPRY4Q9C004 299 aa10.12□□□□□ -0.79
GAPVD1-220ENST00000497580 PVRIGQ6DKI7 326 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 GFRALQ6UXV0 394 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 NDUFA11Q86Y39 141 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 PRSS33Q8NF86 280 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 LINC00574Q9H8X3 128 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 LYNX1G3V0Z9 82 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 CEACAM4O75871 244 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 LYNX1P0DP58 116 aa10.11□□□□□ -0.79
GAPVD1-220ENST00000497580 CD59P13987 128 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 MRPS12O15235 138 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 MEIG1Q5JSS6 88 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 TRAV17A0A0B4J275 112 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 GATA4P43694 442 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 ZNF474Q6S9Z5 364 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 Q6ZS46 218 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 VCX2Q9H322 139 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 DYNLRB1Q9NP97 96 aa10.1□□□□□ -0.79
GAPVD1-220ENST00000497580 RHODO00212 210 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 IGHV1-8P0DP01 117 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 C15orf53Q8NAA6 179 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 IGHV3-64A0A075B6Q5 118 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 IGHV1-3A0A0C4DH29 117 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 UBE2D3P61077 147 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 UBE2D2P62837 147 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 FAM110AQ9BQ89 295 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 NCOR2Q9Y618 2525 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 UBE2D1P51668 147 aa10.09□□□□□ -0.79
GAPVD1-220ENST00000497580 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 NRACQ8N912 160 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 SMIM2Q9BVW6 85 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 IGKV3D-20A0A0C4DH25 116 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 CDX4O14627 284 aaPredicted RBP10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 TNFRSF13BO14836 293 aaPredicted RBP10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 PDE6HQ13956 83 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 CITED1Q99966 193 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 C11orf21Q9P2W6 132 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 IGLV3-9A0A075B6K5 115 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 RASL10AQ92737 203 aa10.08□□□□□ -0.8
GAPVD1-220ENST00000497580 TEX49A0A1B0GTD5 131 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 CFC1P0CG37 223 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 LOXP28300 417 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 DLX6P56179 175 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 TCF15Q12870 199 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 TRAV2A0A0B4J234 112 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 CD7P09564 240 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 C10orf126Q8N4M7 172 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
GAPVD1-220ENST00000497580 BRI3O95415 125 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 S100A4P26447 101 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 ID1P41134 155 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 MFAP4P55083 255 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 TEX36Q5VZQ5 186 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 PRO1854Q9UHT4 67 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 Q6ZS92 163 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 Q8N1Y9 231 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 C14orf178Q8N769 122 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
GAPVD1-220ENST00000497580 CHD8Q9HCK8 2581 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 C11orf86A6NJI1 115 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 SRD5A1P18405 259 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 HERVK_113P61574 105 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 NEXN-AS1Q8NBZ9 246 aa10.05□□□□□ -0.8
GAPVD1-220ENST00000497580 C21orf62Q9NYP8 219 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms