RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 M0R2Z0 102 aa10.41□□□□□ -0.74
VPS26A-209ENST00000497564 CRXO43186 299 aaPredicted RBP10.41□□□□□ -0.74
VPS26A-209ENST00000497564 ZNF324O75467 553 aaPredicted RBP10.41□□□□□ -0.74
VPS26A-209ENST00000497564 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
VPS26A-209ENST00000497564 ZNF575Q86XF7 245 aa10.41□□□□□ -0.74
VPS26A-209ENST00000497564 ZMAT5Q9UDW3 170 aaKnown RBP10.41□□□□□ -0.74
VPS26A-209ENST00000497564 HUWE1Q7Z6Z7 4374 aaKnown RBP10.41□□□□□ -0.74
VPS26A-209ENST00000497564 IGKV3D-20A0A0C4DH25 116 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 J3KRW8 73 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 ORM1P02763 201 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 FAM3BP58499 235 aaPredicted RBP10.4□□□□□ -0.74
VPS26A-209ENST00000497564 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 GTSF1Q8WW33 167 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 NEU1Q99519 415 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 C20orf144Q9BQM9 153 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 WFDC10AQ9H1F0 79 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 NAT8BQ9UHF3 227 aa10.4□□□□□ -0.74
VPS26A-209ENST00000497564 TRAV12-3A0A0B4J271 114 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 A0A1W2PPQ1 181 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 HIGD1CA8MV81 97 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
VPS26A-209ENST00000497564 TDRG1Q3Y452 100 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 DNLZQ5SXM8 178 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 MORN3Q6PF18 240 aaPredicted RBP10.39□□□□□ -0.75
VPS26A-209ENST00000497564 Q6ZQT7 251 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 Q8N1Y9 231 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
VPS26A-209ENST00000497564 TRAV12-2A0A075B6T6 113 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 TGIF2-C20orf24A0A0A6YYL0 155 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 TYMSP04818 313 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 GZMBP10144 247 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 TCL1AP56279 114 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
VPS26A-209ENST00000497564 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
VPS26A-209ENST00000497564 INSP01308 110 aa10.37□□□□□ -0.75
VPS26A-209ENST00000497564 CTRLP40313 264 aa10.37□□□□□ -0.75
VPS26A-209ENST00000497564 ANXA2RQ3ZCQ2 193 aa10.37□□□□□ -0.75
VPS26A-209ENST00000497564 ATP5L2Q7Z4Y8 100 aa10.37□□□□□ -0.75
VPS26A-209ENST00000497564 FAM210BQ96KR6 192 aa10.37□□□□□ -0.75
VPS26A-209ENST00000497564 LINC00467Q9BRT7 94 aa10.37□□□□□ -0.75
VPS26A-209ENST00000497564 MUC4Q99102 2169 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
VPS26A-209ENST00000497564 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 RAB5AP20339 215 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 FXYD7P58549 80 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
VPS26A-209ENST00000497564 RASL11AQ6T310 242 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 FAM159AQ6UWV7 190 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 C1QTNF4Q9BXJ3 329 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 SRD5A3Q9H8P0 318 aa10.36□□□□□ -0.75
VPS26A-209ENST00000497564 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 IGHV1OR15-1A0A075B7D0 117 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
VPS26A-209ENST00000497564 OR5AL1P0C617 328 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 COX19Q49B96 90 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 MUC21Q5SSG8 566 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 TMEM256Q8N2U0 113 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 FER1L6-AS1Q8NA97 138 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 SSBP4Q9BWG4 385 aaPredicted RBP10.35□□□□□ -0.75
VPS26A-209ENST00000497564 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 NAGKQ9UJ70 344 aa10.35□□□□□ -0.75
VPS26A-209ENST00000497564 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
VPS26A-209ENST00000497564 A0A1B0GXF2 115 aa10.34□□□□□ -0.75
VPS26A-209ENST00000497564 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
VPS26A-209ENST00000497564 F2Z2F3 143 aa10.34□□□□□ -0.75
VPS26A-209ENST00000497564 SNAI2O43623 268 aa10.34□□□□□ -0.75
VPS26A-209ENST00000497564 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
VPS26A-209ENST00000497564 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.34□□□□□ -0.75
VPS26A-209ENST00000497564 PGLYRP4Q96LB8 373 aa10.34□□□□□ -0.75
VPS26A-209ENST00000497564 A0A1B0GW15 77 aa10.33□□□□□ -0.76
VPS26A-209ENST00000497564 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
VPS26A-209ENST00000497564 ASIPP42127 132 aa10.33□□□□□ -0.76
VPS26A-209ENST00000497564 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
VPS26A-209ENST00000497564 SCRT2Q9NQ03 307 aa10.33□□□□□ -0.76
VPS26A-209ENST00000497564 XCL2Q9UBD3 114 aa10.33□□□□□ -0.76
VPS26A-209ENST00000497564 TENM3Q9P273 2699 aa10.33□□□□□ -0.76
VPS26A-209ENST00000497564 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
VPS26A-209ENST00000497564 KIR2DL5BA0A0G2JN68 375 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 KIR2DL5BA0A0G2JPC4 375 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 RIGQ13278 110 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 KIR2DL5AQ8N109 375 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 C1orf158Q8N1D5 194 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 CSNK1G2-AS1Q8NCQ2 148 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 KIR2DL5BQ8NHK3 375 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 BORCS7Q96B45 105 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 B9D2Q9BPU9 175 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
VPS26A-209ENST00000497564 IGHV4-4A0A075B6R2 117 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 IGHV3-16A0A0C4DH30 117 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 A8MZ25 164 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 GNRH2O43555 120 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 SPINK4O60575 86 aa10.31□□□□□ -0.76
VPS26A-209ENST00000497564 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
VPS26A-209ENST00000497564 RPS10P46783 165 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms