RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 IGF2P01344 180 aa0.5□□□□□ -2.33
PHC3-216ENST00000497171 POLR2JP52435 117 aaKnown RBP0.5□□□□□ -2.33
PHC3-216ENST00000497171 SPINK13Q1W4C9 94 aa0.5□□□□□ -2.33
PHC3-216ENST00000497171 TAC4Q86UU9 113 aa0.5□□□□□ -2.33
PHC3-216ENST00000497171 DMAC1Q96GE9 116 aa0.5□□□□□ -2.33
PHC3-216ENST00000497171 FAM103A1Q9BTL3 118 aaKnown RBP0.5□□□□□ -2.33
PHC3-216ENST00000497171 ATG5Q9H1Y0 275 aa0.5□□□□□ -2.33
PHC3-216ENST00000497171 MYH1P12882 1939 aa0.5□□□□□ -2.33
PHC3-216ENST00000497171 TRAV36DV7A0A075B6V5 113 aa0.49□□□□□ -2.33
PHC3-216ENST00000497171 SMIM24O75264 130 aa0.49□□□□□ -2.33
PHC3-216ENST00000497171 RPS28P62857 69 aaKnown RBP0.49□□□□□ -2.33
PHC3-216ENST00000497171 C10orf99Q6UWK7 81 aa0.49□□□□□ -2.33
PHC3-216ENST00000497171 C5orf56Q8N8D9 126 aa0.49□□□□□ -2.33
PHC3-216ENST00000497171 SLC35B3Q9H1N7 401 aa0.49□□□□□ -2.33
PHC3-216ENST00000497171 BANF2Q9H503 90 aa0.49□□□□□ -2.33
PHC3-216ENST00000497171 METTL1Q9UBP6 276 aaKnown RBP0.49□□□□□ -2.33
PHC3-216ENST00000497171 ATG2AQ2TAZ0 1938 aa0.48□□□□□ -2.33
PHC3-216ENST00000497171 NBDYA0A0U1RRE5 68 aa0.48□□□□□ -2.33
PHC3-216ENST00000497171 CCKP06307 115 aa0.48□□□□□ -2.33
PHC3-216ENST00000497171 NBEAP1P0C6P0 100 aa0.48□□□□□ -2.33
PHC3-216ENST00000497171 TMEM244Q5VVB8 128 aa0.48□□□□□ -2.33
PHC3-216ENST00000497171 OR4S1Q8NGB4 309 aa0.48□□□□□ -2.33
PHC3-216ENST00000497171 KDM5CP41229 1560 aa0.48□□□□□ -2.33
PHC3-216ENST00000497171 ZNF462Q96JM2 2506 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 C9JAW5 83 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 TNFSF15O95150 251 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 TFF1P04155 84 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 CD3DP04234 171 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 DR1Q01658 176 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 PLGLB1Q02325 96 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 CCDC153Q494R4 210 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 ASB16-AS1Q495Z4 193 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 Q5XG85 94 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 TCTE3Q8IZS6 198 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 TSKUQ8WUA8 353 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 AIF1LQ9BQI0 150 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 PLAC8Q9NZF1 115 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 HIGD1AQ9Y241 93 aa0.47□□□□□ -2.33
PHC3-216ENST00000497171 ZCCHC6Q5VYS8 1495 aaKnown RBP0.47□□□□□ -2.33
PHC3-216ENST00000497171 CDK12Q9NYV4 1490 aaPredicted RBP0.47□□□□□ -2.33
PHC3-216ENST00000497171 ZDBF2Q9HCK1 2354 aa0.46□□□□□ -2.34
PHC3-216ENST00000497171 XIRP1Q702N8 1843 aaKnown RBP0.46□□□□□ -2.34
PHC3-216ENST00000497171 A0A1B0GW64 132 aa0.46□□□□□ -2.34
PHC3-216ENST00000497171 A0A1B0GX51 115 aa0.46□□□□□ -2.34
PHC3-216ENST00000497171 OR2H2O95918 312 aa0.46□□□□□ -2.34
PHC3-216ENST00000497171 APOC1P02654 83 aa0.46□□□□□ -2.34
PHC3-216ENST00000497171 SPANXA1Q9NS26 97 aa0.46□□□□□ -2.34
PHC3-216ENST00000497171 LRP5O75197 1615 aa0.46□□□□□ -2.34
PHC3-216ENST00000497171 ASH1LQ9NR48 2969 aaKnown RBP0.45□□□□□ -2.34
PHC3-216ENST00000497171 TRBV10-1A0A0K0K1A3 114 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 RBP4P02753 201 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 PRH1P02810 166 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 AKR1D1P51857 326 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 RPL37P61927 97 aaKnown RBP0.45□□□□□ -2.34
PHC3-216ENST00000497171 TMEM91Q6ZNR0 172 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 SLC25A26Q70HW3 274 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 DEFB132Q7Z7B7 95 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 AKAP14Q86UN6 197 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 SNX29P2Q8IUI4 249 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 MAGOHBQ96A72 148 aaKnown RBP0.45□□□□□ -2.34
PHC3-216ENST00000497171 SPANXCQ9NY87 97 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 ARHGAP31Q2M1Z3 1444 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 ANKRD30AQ9BXX3 1397 aa0.45□□□□□ -2.34
PHC3-216ENST00000497171 NINQ8N4C6 2090 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 RREB1Q92766 1687 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 AFDNP55196 1824 aaKnown RBP0.44□□□□□ -2.34
PHC3-216ENST00000497171 BORCS7-ASMTA0A0B4J1R7 106 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 DBIP07108 87 aaKnown RBP0.44□□□□□ -2.34
PHC3-216ENST00000497171 SCTP09683 121 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 HLA-DRB4P13762 266 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 CLLU1Q5K131 121 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 PYDC1Q8WXC3 89 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 VPS25Q9BRG1 176 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 TAS2R8Q9NYW2 309 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 NOP16Q9Y3C1 178 aaKnown RBP0.44□□□□□ -2.34
PHC3-216ENST00000497171 DNAJC15Q9Y5T4 150 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 HLA-DRB4X5D2U9 266 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 PTPRGP23470 1445 aa0.44□□□□□ -2.34
PHC3-216ENST00000497171 HELZP42694 1942 aaKnown RBP0.44□□□□□ -2.34
PHC3-216ENST00000497171 KCPQ6ZWJ8 1503 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 KIDINS220Q9ULH0 1771 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 KLKP1Q107X0 134 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 PPDPFLQ8WWR9 84 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 TMEM141Q96I45 108 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 DSCR8Q96T75 97 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 SMR3AQ99954 134 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 TMEM14BQ9NUH8 114 aa0.43□□□□□ -2.34
PHC3-216ENST00000497171 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
PHC3-216ENST00000497171 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
PHC3-216ENST00000497171 COA4Q9NYJ1 87 aa0.42□□□□□ -2.34
PHC3-216ENST00000497171 CPDO75976 1380 aa0.42□□□□□ -2.34
PHC3-216ENST00000497171 RBBP6Q7Z6E9 1792 aaKnown RBP0.42□□□□□ -2.34
PHC3-216ENST00000497171 APCP25054 2843 aa0.41□□□□□ -2.34
PHC3-216ENST00000497171 ZNF670-ZNF695F2Z2N8 137 aa0.41□□□□□ -2.34
PHC3-216ENST00000497171 DYNLRB2Q8TF09 96 aa0.41□□□□□ -2.34
PHC3-216ENST00000497171 PPP1R1CQ8WVI7 109 aa0.41□□□□□ -2.34
PHC3-216ENST00000497171 WDR97A6NE52 1622 aa0.41□□□□□ -2.34
PHC3-216ENST00000497171 CCDC171Q6TFL3 1326 aa0.4□□□□□ -2.34
PHC3-216ENST00000497171 TEX49A0A1B0GTD5 131 aa0.4□□□□□ -2.35
PHC3-216ENST00000497171 TCRBV3S1A0A5B6 114 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms