RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 PATE2Q6UY27 113 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 Q6ZQT7 251 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 C2orf91Q6ZV80 131 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 LYZL2Q7Z4W2 148 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 LYPD6Q86Y78 171 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 Q8NAQ8 132 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 APCDD1LQ8NCL9 501 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 BPIFB6Q8NFQ5 453 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 OR4S1Q8NGB4 309 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 OR10P1Q8NGE3 313 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 SDF2Q99470 211 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 KRTAP1-5Q9BYS1 174 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 SLC39A9Q9NUM3 307 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 MRPL16Q9NX20 251 aaKnown RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 MCTS1Q9ULC4 181 aaKnown RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 TNFSF18Q9UNG2 199 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 BAIAP2Q9UQB8 552 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 HEY1Q9Y5J3 304 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 FAM215AQ9Y5M1 114 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 TRAPPC1Q9Y5R8 145 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 TACC2O95359 2948 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 NUP210LQ5VU65 1888 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 MYO5AQ9Y4I1 1855 aaKnown RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 IGLV4-69A0A075B6H9 119 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 A0A087X0T9 212 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 A0A1B0GU33 70 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 LOC100130705A0A1B0GUX0 176 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 A0A1W2PQD3 144 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 GRIFINA4D1Z8 144 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 C1orf196B1AJZ1 125 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 K7ERU9 68 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 WISP3O95389 354 aaPredicted RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 NAPSAO96009 420 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 IGLV7-43P04211 117 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 GPX1P07203 203 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 PAEPP09466 180 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 METTL15P1P0C7V9 234 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 LGALS3P17931 250 aaKnown RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 AZU1P20160 251 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 SDC2P34741 201 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 XCL1P47992 114 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 YPEL3P61236 119 aaPredicted RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 NCS1P62166 190 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 UBE2BP63146 152 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 EIF5AP63241 154 aaKnown RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 SUPT4H1P63272 117 aaKnown RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 AKR1C1Q04828 323 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 FUT5Q11128 374 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 BIKQ13323 160 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 TAF9Q16594 264 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 OCIAD2Q56VL3 154 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 TMEM69Q5SWH9 247 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 C6orf52Q5T4I8 152 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 C22orf39Q6P5X5 142 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 ZNF767PQ75MW2 155 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 MIR17HGQ75NE6 70 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 LINC00305Q7Z4B0 112 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 BPIFA4PQ86YQ2 179 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 ZNF695Q8IW36 515 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 PDZD9Q8IXQ8 264 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 C10orf126Q8N4M7 172 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 OR51A4Q8NGJ6 313 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 MGLLQ99685 303 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 NAA38Q9BRA0 125 aaKnown RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 ZNF471Q9BX82 626 aaPredicted RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 TCEAL2Q9H3H9 227 aaPredicted RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 OSTCQ9NRP0 149 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 MARCOQ9UEW3 520 aaPredicted RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 INTS1Q8N201 2190 aaKnown RBP1.15□□□□□ -2.23
UBR4-217ENST00000497018 DOCK10Q96BY6 2186 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 COL7A1Q02388 2944 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 ZNF407Q9C0G0 2248 aa1.15□□□□□ -2.23
UBR4-217ENST00000497018 MUC2Q02817 5179 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 PRR14LQ5THK1 2151 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 MDC1Q14676 2089 aaKnown RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 UNC13CQ8NB66 2214 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 TRAV13-1A0A0B4J241 112 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 A0A0J9YW62 118 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 FAM25AB3EWG3 89 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 FAM25CB3EWG5 89 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 FAM25GB3EWG6 89 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 GGTLC3B5MD39 225 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 F6UZH7 168 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 CORTO00230 105 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 TXNDC9O14530 226 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 TP53I11O14683 189 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 NPFFO15130 113 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 GGCTO75223 188 aaKnown RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 CST7O76096 145 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 CLPSP04118 112 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 GZMBP10144 247 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 MUC1P15941 1255 aaPredicted RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 ZNF22P17026 224 aaPredicted RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 MDKP21741 143 aaPredicted RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 CRYGSP22914 178 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 S100A4P26447 101 aaKnown RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 FUSP35637 526 aaKnown RBP eCLIP1.14□□□□□ -2.23
UBR4-217ENST00000497018 SRP14P37108 136 aaKnown RBP1.14□□□□□ -2.23
UBR4-217ENST00000497018 RAB5CP51148 216 aa1.14□□□□□ -2.23
UBR4-217ENST00000497018 AKR1D1P51857 326 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms