RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 IFNA1P01562 189 aa10.44□□□□□ -0.74
NEK4-206ENST00000496822 MED14OSP0DP75 135 aa10.44□□□□□ -0.74
NEK4-206ENST00000496822 ESRGQ1W209 222 aa10.44□□□□□ -0.74
NEK4-206ENST00000496822 C18orf15Q96N68 181 aa10.44□□□□□ -0.74
NEK4-206ENST00000496822 NKX6-2Q9C056 277 aaPredicted RBP10.44□□□□□ -0.74
NEK4-206ENST00000496822 MRPL16Q9NX20 251 aaKnown RBP10.44□□□□□ -0.74
NEK4-206ENST00000496822 ARL2-SNX15V9GYD0 113 aa10.44□□□□□ -0.74
NEK4-206ENST00000496822 IGHV1OR15-1A0A075B7D0 117 aa10.43□□□□□ -0.74
NEK4-206ENST00000496822 H3BNG1 76 aa10.43□□□□□ -0.74
NEK4-206ENST00000496822 TAGLN2P37802 199 aaKnown RBP10.43□□□□□ -0.74
NEK4-206ENST00000496822 IBA57Q5T440 356 aaKnown RBP10.43□□□□□ -0.74
NEK4-206ENST00000496822 SUN5Q8TC36 379 aa10.43□□□□□ -0.74
NEK4-206ENST00000496822 Q9H8V8 135 aa10.43□□□□□ -0.74
NEK4-206ENST00000496822 MANBALQ9NQG1 85 aa10.43□□□□□ -0.74
NEK4-206ENST00000496822 ABCA13Q86UQ4 5058 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 LRP1BQ9NZR2 4599 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 A0A096LPF7 62 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 A0A1B0GV50 99 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 RBAKDNA6NC62 111 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 CSN1S1P47710 185 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 MUC21Q5SSG8 566 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 UPK3BQ9BT76 320 aa10.42□□□□□ -0.74
NEK4-206ENST00000496822 MRPS16Q9Y3D3 137 aaKnown RBP10.42□□□□□ -0.74
NEK4-206ENST00000496822 TRBV7-9A0A0J9YWB2 115 aa10.41□□□□□ -0.74
NEK4-206ENST00000496822 A0A1W2PRE2 83 aa10.41□□□□□ -0.74
NEK4-206ENST00000496822 DIRC3C9JPN6 131 aa10.41□□□□□ -0.74
NEK4-206ENST00000496822 CMTM2Q8TAZ6 248 aa10.41□□□□□ -0.74
NEK4-206ENST00000496822 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
NEK4-206ENST00000496822 RPH3ALQ9UNE2 315 aa10.41□□□□□ -0.74
NEK4-206ENST00000496822 TXNDC17Q9BRA2 123 aa10.4□□□□□ -0.74
NEK4-206ENST00000496822 MDFICQ9P1T7 246 aa10.4□□□□□ -0.74
NEK4-206ENST00000496822 GNG13Q9P2W3 67 aa10.4□□□□□ -0.74
NEK4-206ENST00000496822 HSPG2P98160 4391 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 UBE2G2P60604 165 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 IFITM2Q01629 132 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 ZNF415Q09FC8 603 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 CST9LP1Q5W188 147 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 Q6AWC8 147 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 ARL6IP6Q8N6S5 226 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
NEK4-206ENST00000496822 PGPA6NDG6 321 aa10.38□□□□□ -0.75
NEK4-206ENST00000496822 F6UZH7 168 aa10.38□□□□□ -0.75
NEK4-206ENST00000496822 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
NEK4-206ENST00000496822 CLLU1Q5K131 121 aa10.38□□□□□ -0.75
NEK4-206ENST00000496822 GOLT1AQ6ZVE7 132 aa10.38□□□□□ -0.75
NEK4-206ENST00000496822 LENEPQ9Y5L5 61 aa10.38□□□□□ -0.75
NEK4-206ENST00000496822 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 FAM74A7A6NL05 159 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 K7EQM0 130 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 PAX4O43316 350 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 PAGE4O60829 102 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 GNG5P63218 68 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 FHL2Q14192 279 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 TMEM183BQ1AE95 376 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 TMEM183AQ8IXX5 376 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 MUC4Q99102 2169 aa10.37□□□□□ -0.75
NEK4-206ENST00000496822 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 C16orf90A8MZG2 172 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 SFTA3P0C7M3 94 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 BCL2P10415 239 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 CRYBA4P53673 196 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 SUMO1P63165 101 aaKnown RBP10.36□□□□□ -0.75
NEK4-206ENST00000496822 C8orf49Q96NF6 230 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 PRO0255Q9UI72 69 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 VAX2Q9UIW0 290 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 NAGKQ9UJ70 344 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 ICOSQ9Y6W8 199 aa10.36□□□□□ -0.75
NEK4-206ENST00000496822 GGTLC3B5MD39 225 aa10.35□□□□□ -0.75
NEK4-206ENST00000496822 CCL20P78556 96 aa10.35□□□□□ -0.75
NEK4-206ENST00000496822 MEF2BQ02080 365 aaPredicted RBP10.35□□□□□ -0.75
NEK4-206ENST00000496822 FAM159AQ6UWV7 190 aa10.35□□□□□ -0.75
NEK4-206ENST00000496822 PCNPQ8WW12 178 aaKnown RBP10.35□□□□□ -0.75
NEK4-206ENST00000496822 HIST1H2BAQ96A08 127 aa10.35□□□□□ -0.75
NEK4-206ENST00000496822 ZNF479Q96JC4 524 aa10.35□□□□□ -0.75
NEK4-206ENST00000496822 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
NEK4-206ENST00000496822 APOBP04114 4563 aaKnown RBP10.35□□□□□ -0.75
NEK4-206ENST00000496822 A0A1W2PPQ1 181 aa10.34□□□□□ -0.75
NEK4-206ENST00000496822 RBFOX3A6NFN3 312 aa10.34□□□□□ -0.75
NEK4-206ENST00000496822 FBLL1A6NHQ2 334 aaKnown RBP10.34□□□□□ -0.75
NEK4-206ENST00000496822 PDE6DO43924 150 aa10.34□□□□□ -0.75
NEK4-206ENST00000496822 NXPH4O95158 308 aa10.34□□□□□ -0.75
NEK4-206ENST00000496822 EIF5A2Q9GZV4 153 aaKnown RBP10.34□□□□□ -0.75
NEK4-206ENST00000496822 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
NEK4-206ENST00000496822 TRGV11A0A075B6L2 103 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 GNRH2O43555 120 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 LINC00315P59091 139 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 CYB561D1Q8N8Q1 229 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 RASL10AQ92737 203 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 SGK494Q96LW2 274 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 FAM210AQ96ND0 272 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 EPDR1Q9UM22 224 aa10.33□□□□□ -0.76
NEK4-206ENST00000496822 TRGV4A0A0C4DH28 118 aa10.32□□□□□ -0.76
NEK4-206ENST00000496822 IGHV3-16A0A0C4DH30 117 aa10.32□□□□□ -0.76
NEK4-206ENST00000496822 PEX7O00628 323 aa10.32□□□□□ -0.76
NEK4-206ENST00000496822 SIVA1O15304 175 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms