RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 ARL3P36405 182 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 GNG4P50150 75 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 SEC11AP67812 179 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 DEFB114Q30KQ6 69 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 RBPMS2Q6ZRY4 209 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 TMEM61Q8N0U2 210 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 OR4C5Q8NGB2 326 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 OR1L6Q8NGR2 347 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 CACNG8Q8WXS5 425 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 EEF1AKMT3Q96AZ1 226 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 ALKBH7Q9BT30 221 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 NRN1Q9NPD7 142 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 ZNF331Q9NQX6 463 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 PAM16Q9Y3D7 125 aa4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 YTHDF2Q9Y5A9 579 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-229ENST00000496818 TENM2Q9NT68 2774 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 EPPK1P58107 5090 aaKnown RBP4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 DYNC2H1Q8NCM8 4307 aaKnown RBP4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 A0A0J9YWU9 116 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 TEX50A0A1B0GTY4 177 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 SMIM27A0A1W2PRY6 76 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 IGLC7A0M8Q6 106 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 PGPEP1LA6NFU8 196 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 CRYGBP07316 175 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 SAA1P0DJI8 122 aaPredicted RBP4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 RNASE2P10153 161 aaKnown RBP4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 HIST1H1EP10412 219 aaKnown RBP4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 GTF2H5Q6ZYL4 71 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 TMEM256Q8N2U0 113 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 ZNF114Q8NC26 417 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 STXBP6Q8NFX7 210 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 PRSS3P2Q8NHM4 247 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 GRAMD2BQ96HH9 432 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 DERL1Q9BUN8 251 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 GFRA4Q9GZZ7 299 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 TMEM191AQ9H0A3 160 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 ZNF430Q9H8G1 570 aaPredicted RBP4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 NAT8BQ9UHF3 227 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 TP53TG1Q9Y2A0 90 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 V9GYV3 84 aa4.28□□□□□ -1.72
CACNA1C-229ENST00000496818 SACSQ9NZJ4 4579 aa4.28□□□□□ -1.73
CACNA1C-229ENST00000496818 STAB2Q8WWQ8 2551 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 TRAV25A0A0B4J276 109 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 A0A1B0GW15 77 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 TMEM213A2RRL7 107 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 HELTA6NFD8 242 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 SRRM4A7MD48 611 aaKnown RBP4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 HSBP1O75506 76 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 MYOD1P15172 320 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 CBLN1P23435 193 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 RPL27AP46776 148 aaKnown RBP4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 KRTDAPP60985 99 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 UBE2G1P62253 170 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 RPL8P62917 257 aaKnown RBP4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 HIST1H1AQ02539 215 aaPredicted RBP4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 DEFB135Q30KP9 77 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 PIK3CD-AS1Q5SR53 167 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 C10orf55Q5SWW7 151 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 SERTAD4-AS1Q5TG53 156 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 SPATA31B1PQ5VZV4 182 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 CEMP1Q6PRD7 247 aaPredicted RBP4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 CLEC19AQ6UXS0 136 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 TMEM136Q6ZRR5 245 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 SPATA12Q7Z6I5 190 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 GPHB5Q86YW7 130 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 TTC9CQ8N5M4 171 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 OCC1Q8TAD7 63 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 TMEM167AQ8TBQ9 72 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 SPAG8Q99932 426 aaPredicted RBP4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 OVOL2Q9BRP0 275 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 NDUFA4L2Q9NRX3 87 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 MSRB1Q9NZV6 116 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 UFC1Q9Y3C8 167 aa4.27□□□□□ -1.73
CACNA1C-229ENST00000496818 TRBV7-1A0A0A6YYK4 115 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 A0A1W2PS18 150 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 CBY3A6NI87 242 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 CGB1A6NKQ9 187 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 K7EN84 100 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 SIVA1O15304 175 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 IGHV3-23P01764 117 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 APCSP02743 223 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 C3orf79P0CE67 100 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 C8orf88P0DMB2 117 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 CRYBB3P26998 211 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 GPR183P32249 361 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 SUB1P53999 127 aaKnown RBP eCLIP4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 ERHP84090 104 aaKnown RBP4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 KIAA2026Q5HYC2 2103 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 IBA57Q5T440 356 aaKnown RBP4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 Q6AWC8 147 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 PVRIGQ6DKI7 326 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 PRR27Q6MZM9 219 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 NIT1Q86X76 327 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 Q8N976 141 aa4.26□□□□□ -1.73
CACNA1C-229ENST00000496818 THAP8Q8NA92 274 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms