RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 LCN12Q6JVE5 192 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 OR2T10Q8NGZ9 312 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 JPT2Q9H910 190 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 SLC39A9Q9NUM3 307 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 DPM3Q9P2X0 92 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 WDR83OSQ9Y284 106 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 TMEM250H0YL14 139 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 CXorf1O96002 111 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 Q0VG73 95 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 MORN5Q5VZ52 161 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 SLC25A34Q6PIV7 304 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
SSBP1-213ENST00000496622 RAB37Q96AX2 223 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 AJUBAQ96IF1 538 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 VGLL1Q99990 258 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 SDF2L1Q9HCN8 221 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 C21orf62Q9NYP8 219 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 YTHDF2Q9Y5A9 579 aaKnown RBP4.81□□□□□ -1.64
SSBP1-213ENST00000496622 PXMP4Q9Y6I8 212 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 NIPBLQ6KC79 2804 aaeCLIP4.81□□□□□ -1.64
SSBP1-213ENST00000496622 OOSP1A8MZH6 123 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 C17orf112F2Z3M2 114 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 SAA4P35542 130 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 HERVK_113P63121 156 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 SERF2P84101 59 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 BAGE3Q86Y29 109 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 BAGE2Q86Y30 109 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 TMEM167AQ8TBQ9 72 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 NPIPB3Q92617 1050 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 PRELID3AQ96N28 172 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 HIVEP1P15822 2718 aa4.81□□□□□ -1.64
SSBP1-213ENST00000496622 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 LINC01548A6NM66 108 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 APOHP02749 345 aaPredicted RBP4.8□□□□□ -1.64
SSBP1-213ENST00000496622 SLC25A5P05141 298 aaKnown RBP4.8□□□□□ -1.64
SSBP1-213ENST00000496622 GPR183P32249 361 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 NDPQ00604 133 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 FOXI1Q12951 378 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 TMEM30BQ3MIR4 351 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 VMA21Q3ZAQ7 101 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 LINC01356Q8N9X3 169 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 OR11H6Q8NGC7 330 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 SIGLEC8Q9NYZ4 499 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 LINC00527Q9UJ94 153 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 TP53TG1Q9Y2A0 90 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 LSM4Q9Y4Z0 139 aaKnown RBP4.8□□□□□ -1.64
SSBP1-213ENST00000496622 IGHV3OR16-8A0A075B7F1 116 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 TRAV5A0A0B4J249 113 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 IGHV3-35A0A0C4DH35 117 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 F2Z2F3 143 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 NDUFA7O95182 113 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 APOMO95445 188 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 CRISP2P16562 243 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 IL3RAP26951 378 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 ERHP84090 104 aaKnown RBP4.8□□□□□ -1.64
SSBP1-213ENST00000496622 ASPHD1Q5U4P2 390 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 FAM90A2PQ658T7 463 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 C18orf32Q8TCD1 76 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 SRSF12Q8WXF0 261 aaKnown RBP4.8□□□□□ -1.64
SSBP1-213ENST00000496622 C1RLQ9NZP8 487 aa4.8□□□□□ -1.64
SSBP1-213ENST00000496622 KLK5Q9Y337 293 aaPredicted RBP4.8□□□□□ -1.64
SSBP1-213ENST00000496622 TRAV40A0A0B4J280 105 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 ODF3BA8MYP8 253 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 MPDU1O75352 247 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 FSTL3O95633 263 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 IGHV3-23P01764 117 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 MT-ND6P03923 174 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 ELANEP08246 267 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 ARL14EPLP0DKL9 152 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 IGHV4-38-2P0DP08 117 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 RPL27AP46776 148 aaKnown RBP4.79□□□□□ -1.64
SSBP1-213ENST00000496622 ATP5G3P48201 142 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 ZNF506Q5JVG8 444 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 MIR17HGQ75NE6 70 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 NOTCH1P46531 2555 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 BCL2P10415 239 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 CX3CL1P78423 397 aa4.79□□□□□ -1.64
SSBP1-213ENST00000496622 MRPL32Q9BYC8 188 aaKnown RBP4.79□□□□□ -1.64
SSBP1-213ENST00000496622 H3BTX0 84 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 M0R1W7 72 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 CRLF1O75462 422 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 HLA-DRB1P01911 266 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 NPPCP23582 126 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 NMUP48645 174 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 FXYD3Q14802 87 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 C2orf83Q53S99 150 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 IBA57Q5T440 356 aaKnown RBP4.78□□□□□ -1.64
SSBP1-213ENST00000496622 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 BCL6BQ8N143 479 aaPredicted RBP4.78□□□□□ -1.64
SSBP1-213ENST00000496622 C10orf105Q8TEF2 133 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 TNFRSF19Q9NS68 423 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 LOC102723971A0A1B0GUV8 181 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 MDFIC2A0A1B0GVS7 189 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 Q56UQ5 140 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 GOLT1AQ6ZVE7 132 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 FAM231DQ6ZW35 169 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 MMD2Q8IY49 270 aa4.78□□□□□ -1.64
SSBP1-213ENST00000496622 GATD1Q8NB37 220 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms