RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 VSIG2Q96IQ7 327 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 NKX6-2Q9C056 277 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 MUC4Q99102 2169 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 FAT2Q9NYQ8 4349 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 hCG_2014768A0A024R1R8 64 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 TRGV11A0A075B6L2 103 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 A0A0J9YY99 117 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 NUDT3O95989 172 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 GCGP01275 180 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 IFNA7P01567 189 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 PFN1P07737 140 aaKnown RBP11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 EIF5AP63241 154 aaKnown RBP11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 Q86TA4 180 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 HIST1H2BAQ96A08 127 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
DNMT3A-215ENST00000496570 H3BNG1 76 aa11.21□□□□□ -0.61
DNMT3A-215ENST00000496570 PAGE4O60829 102 aa11.21□□□□□ -0.61
DNMT3A-215ENST00000496570 RASL10AQ92737 203 aa11.21□□□□□ -0.61
DNMT3A-215ENST00000496570 SPXQ9BT56 116 aa11.21□□□□□ -0.61
DNMT3A-215ENST00000496570 A0A1B0GV50 99 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 IGHV3-53P01767 116 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 FHL2Q14192 279 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 SMUG1Q53HV7 270 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 AKAP14Q86UN6 197 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
DNMT3A-215ENST00000496570 HECTD4Q9Y4D8 3996 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 A0A1B0GVG6 124 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 CRIP1P50238 77 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 CCL20P78556 96 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 Q6ZR54 194 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 KCNS1Q96KK3 526 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
DNMT3A-215ENST00000496570 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 CST9LP1Q5W188 147 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 ZNF575Q86XF7 245 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 C9orf62Q8N4C0 152 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 ZC2HC1AQ96GY0 325 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 ZNF479Q96JC4 524 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 TCEAL7Q9BRU2 100 aa11.18□□□□□ -0.62
DNMT3A-215ENST00000496570 IGLV2-18A0A075B6J9 118 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 A0A096LPF7 62 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 IGKV3D-20A0A0C4DH25 116 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 M0R2N4 97 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 M0R2P5 195 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 SFTA3P0C7M3 94 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 SULT1A2P50226 295 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 PPT1P50897 306 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 FAM3BP58499 235 aaPredicted RBP11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 ZFP69Q49AA0 526 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 C9orf85Q96MD7 179 aa11.17□□□□□ -0.62
DNMT3A-215ENST00000496570 LTAP01374 205 aa11.16□□□□□ -0.62
DNMT3A-215ENST00000496570 RNASE3P12724 160 aaKnown RBP11.16□□□□□ -0.62
DNMT3A-215ENST00000496570 CRYBA4P53673 196 aa11.16□□□□□ -0.62
DNMT3A-215ENST00000496570 ESRGQ1W209 222 aa11.16□□□□□ -0.62
DNMT3A-215ENST00000496570 SLC51BQ86UW2 128 aa11.16□□□□□ -0.62
DNMT3A-215ENST00000496570 SCO2A0A1W2PP80 73 aa11.15□□□□□ -0.62
DNMT3A-215ENST00000496570 RAB5CP51148 216 aa11.15□□□□□ -0.62
DNMT3A-215ENST00000496570 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
DNMT3A-215ENST00000496570 ZFP30Q9Y2G7 519 aa11.15□□□□□ -0.62
DNMT3A-215ENST00000496570 TRAV4A0A0B4J268 109 aa11.14□□□□□ -0.63
DNMT3A-215ENST00000496570 FABP5P3A8MUU1 101 aa11.14□□□□□ -0.63
DNMT3A-215ENST00000496570 RTL8CO15255 209 aa11.14□□□□□ -0.63
DNMT3A-215ENST00000496570 AKR1C3P42330 323 aa11.14□□□□□ -0.63
DNMT3A-215ENST00000496570 CCL18P55774 89 aa11.14□□□□□ -0.63
DNMT3A-215ENST00000496570 HHLA3Q9XRX5 114 aa11.14□□□□□ -0.63
DNMT3A-215ENST00000496570 PAX4O43316 350 aa11.13□□□□□ -0.63
DNMT3A-215ENST00000496570 SH2D1AO60880 128 aa11.13□□□□□ -0.63
DNMT3A-215ENST00000496570 UBE2G1P62253 170 aa11.13□□□□□ -0.63
DNMT3A-215ENST00000496570 ZNF674Q2M3X9 581 aa11.13□□□□□ -0.63
DNMT3A-215ENST00000496570 EIF5AL1Q6IS14 154 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-215ENST00000496570 PGPEP1LA6NFU8 196 aa11.12□□□□□ -0.63
DNMT3A-215ENST00000496570 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
DNMT3A-215ENST00000496570 PTH2Q96A98 100 aa11.12□□□□□ -0.63
DNMT3A-215ENST00000496570 UPK3BQ9BT76 320 aa11.12□□□□□ -0.63
DNMT3A-215ENST00000496570 MLST8Q9BVC4 326 aa11.12□□□□□ -0.63
DNMT3A-215ENST00000496570 PKD1P98161 4303 aa11.12□□□□□ -0.63
DNMT3A-215ENST00000496570 TRGV4A0A0C4DH28 118 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 SLAQ13239 276 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 NHLRC2Q8NBF2 726 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 OR4C5Q8NGB2 326 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 MANBALQ9NQG1 85 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
DNMT3A-215ENST00000496570 C9JCJ5 164 aa11.1□□□□□ -0.63
DNMT3A-215ENST00000496570 RS1O15537 224 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms