RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 ORM1P02763 201 aa8.82□□□□□ -1
FN1-226ENST00000496542 ARL14EPLP0DKL9 152 aa8.82□□□□□ -1
FN1-226ENST00000496542 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
FN1-226ENST00000496542 CDC34P49427 236 aaPredicted RBP8.82□□□□□ -1
FN1-226ENST00000496542 ERVFC1-1P60608 527 aa8.82□□□□□ -1
FN1-226ENST00000496542 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
FN1-226ENST00000496542 IQCF2Q8IXL9 164 aa8.82□□□□□ -1
FN1-226ENST00000496542 HSD17B11Q8NBQ5 300 aa8.82□□□□□ -1
FN1-226ENST00000496542 OR4C5Q8NGB2 326 aa8.82□□□□□ -1
FN1-226ENST00000496542 TVP23CQ96ET8 276 aa8.82□□□□□ -1
FN1-226ENST00000496542 SGK494Q96LW2 274 aa8.82□□□□□ -1
FN1-226ENST00000496542 SDF2L1Q9HCN8 221 aa8.82□□□□□ -1
FN1-226ENST00000496542 LY96Q9Y6Y9 160 aa8.82□□□□□ -1
FN1-226ENST00000496542 TRAV9-2A0A087WT02 112 aa8.81□□□□□ -1
FN1-226ENST00000496542 C9JCJ5 164 aa8.81□□□□□ -1
FN1-226ENST00000496542 TYMSP04818 313 aa8.81□□□□□ -1
FN1-226ENST00000496542 Q8N1X5 172 aa8.81□□□□□ -1
FN1-226ENST00000496542 LOC100131303A0A0U1RQF7 123 aa8.8□□□□□ -1
FN1-226ENST00000496542 DNAH10OSP0CZ25 163 aa8.8□□□□□ -1
FN1-226ENST00000496542 NFE4Q86UQ8 179 aa8.8□□□□□ -1
FN1-226ENST00000496542 ARL6IP6Q8N6S5 226 aa8.8□□□□□ -1
FN1-226ENST00000496542 ASB13Q8WXK3 278 aa8.8□□□□□ -1
FN1-226ENST00000496542 TXNDC17Q9BRA2 123 aa8.8□□□□□ -1
FN1-226ENST00000496542 NDFIP1Q9BT67 221 aa8.8□□□□□ -1
FN1-226ENST00000496542 SCRT2Q9NQ03 307 aa8.8□□□□□ -1
FN1-226ENST00000496542 STAG3L2P0CL84 134 aa8.79□□□□□ -1
FN1-226ENST00000496542 STAG3L3P0CL85 134 aa8.79□□□□□ -1
FN1-226ENST00000496542 EVI2AP22794 236 aa8.79□□□□□ -1
FN1-226ENST00000496542 GCHFRP30047 84 aa8.79□□□□□ -1
FN1-226ENST00000496542 C5orf17Q8NAS9 161 aa8.79□□□□□ -1
FN1-226ENST00000496542 NHLRC2Q8NBF2 726 aa8.79□□□□□ -1
FN1-226ENST00000496542 OR2G3Q8NGZ4 309 aa8.79□□□□□ -1
FN1-226ENST00000496542 RAB24Q969Q5 203 aa8.79□□□□□ -1
FN1-226ENST00000496542 KCNS1Q96KK3 526 aa8.79□□□□□ -1
FN1-226ENST00000496542 MSRB1Q9NZV6 116 aa8.79□□□□□ -1
FN1-226ENST00000496542 SERTM2A0A1B0GWG4 89 aa8.78□□□□□ -1
FN1-226ENST00000496542 GATA1P15976 413 aaPredicted RBP8.78□□□□□ -1
FN1-226ENST00000496542 ATP6V0CP27449 155 aa8.78□□□□□ -1
FN1-226ENST00000496542 PSMG3Q9BT73 122 aaPredicted RBP8.78□□□□□ -1
FN1-226ENST00000496542 MED28Q9H204 178 aa8.78□□□□□ -1
FN1-226ENST00000496542 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
FN1-226ENST00000496542 A0A087WTM6 91 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 FBLL1A6NHQ2 334 aaKnown RBP8.77□□□□□ -1.01
FN1-226ENST00000496542 K7EQM0 130 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 TCRAP04437 139 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 CRYGDP07320 174 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 PPT1P50897 306 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 ZNF80P51504 273 aaPredicted RBP8.77□□□□□ -1.01
FN1-226ENST00000496542 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 AQP10Q96PS8 301 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 SH3BGRL3Q9H299 93 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 C11orf21Q9P2W6 132 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 PSG8Q9UQ74 426 aa8.77□□□□□ -1.01
FN1-226ENST00000496542 GGTLC3B5MD39 225 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 PTTG1O95997 202 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 GCGP01275 180 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 MBP02144 154 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 ZFP69Q49AA0 526 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 CDPF1Q6NVV7 123 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 PRNTQ86SH4 94 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 TMEM75Q8N9X5 138 aa8.76□□□□□ -1.01
FN1-226ENST00000496542 IGHV3-73A0A0B4J1V6 119 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 K7EP13 123 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 TAAR5O14804 337 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 CXorf1O96002 111 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
FN1-226ENST00000496542 SERF2P84101 59 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 FLI1Q01543 452 aaPredicted RBP8.75□□□□□ -1.01
FN1-226ENST00000496542 SMUG1Q53HV7 270 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 CFAP126Q5VTH2 177 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 DPPA3Q6W0C5 159 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 CYB561D1Q8N8Q1 229 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 SUN5Q8TC36 379 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 ACTR3CQ9C0K3 210 aaPredicted RBP8.75□□□□□ -1.01
FN1-226ENST00000496542 TMEM167BQ9NRX6 74 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 EPDR1Q9UM22 224 aa8.75□□□□□ -1.01
FN1-226ENST00000496542 RS1O15537 224 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 IGLV2-11P01706 119 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 PFN1P07737 140 aaKnown RBP8.74□□□□□ -1.01
FN1-226ENST00000496542 TIRAPP58753 221 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 Q5BKY6 102 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 C9orf85Q96MD7 179 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 BATF3Q9NR55 127 aa8.74□□□□□ -1.01
FN1-226ENST00000496542 FXYD6-FXYD2A0A087WZ82 144 aa8.73□□□□□ -1.01
FN1-226ENST00000496542 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
FN1-226ENST00000496542 GIPP09681 153 aaPredicted RBP8.73□□□□□ -1.01
FN1-226ENST00000496542 RHOHQ15669 191 aa8.73□□□□□ -1.01
FN1-226ENST00000496542 OR10J3Q5JRS4 329 aa8.73□□□□□ -1.01
FN1-226ENST00000496542 ZNF506Q5JVG8 444 aa8.73□□□□□ -1.01
FN1-226ENST00000496542 RPL7L1Q6DKI1 246 aaKnown RBP8.73□□□□□ -1.01
FN1-226ENST00000496542 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
FN1-226ENST00000496542 TNFSF18Q9UNG2 199 aa8.73□□□□□ -1.01
FN1-226ENST00000496542 DMBT1Q9UGM3 2413 aaPredicted RBP8.73□□□□□ -1.01
FN1-226ENST00000496542 BORCS7-ASMTA0A0B4J1R7 106 aa8.72□□□□□ -1.01
FN1-226ENST00000496542 TRAV8-6A0A0B4J262 113 aa8.72□□□□□ -1.01
FN1-226ENST00000496542 TRAV34A0A0B4J273 112 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms