RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MBNL2Q5VZF2 373 aaKnown RBP7.05□□□□□ -1.28
HPS4-217ENST00000496385 C15orf53Q8NAA6 179 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 ODF3Q96PU9 254 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 IMUPQ9GZP8 106 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 CDSNQ15517 529 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 Q8N1Y9 231 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 SHANK2-AS3Q9BTD1 123 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 FZR1Q9UM11 496 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 CENPEQ02224 2701 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 TRBV7-7A0A0K0K1E9 115 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 LINC01548A6NM66 108 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 ZNF815PA8K554 130 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 SCGB2A1O75556 95 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 VMA21Q3ZAQ7 101 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 SCGB1D4Q6XE38 83 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 SEM1Q6ZVN7 128 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 ZNRF1Q8ND25 227 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 TRAV25A0A0B4J276 109 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 M0R2P5 195 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 COX6B1P14854 86 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
HPS4-217ENST00000496385 Q71RC1 249 aaPredicted RBP7.04□□□□□ -1.28
HPS4-217ENST00000496385 C9orf106Q8NAJ2 232 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 C8orf49Q96NF6 230 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 INTS1Q8N201 2190 aaKnown RBP7.04□□□□□ -1.28
HPS4-217ENST00000496385 DOPEY2Q9Y3R5 2298 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 DOCK7Q96N67 2140 aa7.04□□□□□ -1.28
HPS4-217ENST00000496385 TRAV2A0A0B4J234 112 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 H3BRN7 92 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 IGHV3-48P01763 117 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 ATP5J2P56134 94 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 LYZP61626 148 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 PAPPA-AS1Q5QFB9 102 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 UTF1Q5T230 341 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 PRR25Q96S07 402 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 ONECUT1Q9UBC0 465 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 TMSB15BA0A087X1C1 80 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 SMIM9A6NGZ8 99 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 C9JAW5 83 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 LHBP01229 141 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 EGR2P11161 476 aaPredicted RBP7.03□□□□□ -1.28
HPS4-217ENST00000496385 DSCAML1Q8TD84 2053 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 PRADC1Q9BSG0 188 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 IGKV3-15P01624 115 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 ATP5G1P05496 136 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 CFC1P0CG37 223 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 ADORA2A-AS1P86434 159 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 IL17RELQ6ZVW7 336 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 CNEP1R1Q8N9A8 125 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 NEXN-AS1Q8NBZ9 246 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 TIMD4Q96H15 378 aa7.03□□□□□ -1.28
HPS4-217ENST00000496385 DCHS2Q6V1P9 2916 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 HECTD1Q9ULT8 2610 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 USP9YO00507 2555 aaPredicted RBP7.02□□□□□ -1.29
HPS4-217ENST00000496385 A0A0G2JNJ9 132 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 J3KT08 172 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 LGALS9O00182 355 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 ATXN8Q156A1 80 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 ZNF672Q499Z4 452 aaPredicted RBP7.02□□□□□ -1.29
HPS4-217ENST00000496385 Q6ZQT7 251 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 Q9UFV3 132 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 TIMM23O14925 209 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 MRPS12O15235 138 aaKnown RBP7.02□□□□□ -1.29
HPS4-217ENST00000496385 IGLV2-23P01705 113 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 DTX2Q86UW9 622 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
HPS4-217ENST00000496385 C21orf62Q9NYP8 219 aa7.02□□□□□ -1.29
HPS4-217ENST00000496385 ICE1Q9Y2F5 2266 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 DOPEY1Q5JWR5 2465 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 A0A0J9YY99 117 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 TRBV10-2A0A0K0K1G8 114 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 HERVK_113P61574 105 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 C8orf31Q8N9H6 132 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 TOMM6Q96B49 74 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 IGHV3-30P01768 117 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 IGHV3-30-5P0DP03 117 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 SLC25A29Q8N8R3 303 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 VKORC1Q9BQB6 163 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 CELSR2Q9HCU4 2923 aa7.01□□□□□ -1.29
HPS4-217ENST00000496385 A0A0B4J2C4 111 aa7□□□□□ -1.29
HPS4-217ENST00000496385 H3BMM0 161 aa7□□□□□ -1.29
HPS4-217ENST00000496385 LINC01620Q4KN68 170 aa7□□□□□ -1.29
HPS4-217ENST00000496385 DEFB121Q5J5C9 76 aa7□□□□□ -1.29
HPS4-217ENST00000496385 C10orf55Q5SWW7 151 aa7□□□□□ -1.29
HPS4-217ENST00000496385 NRACQ8N912 160 aa7□□□□□ -1.29
HPS4-217ENST00000496385 C1orf162Q8NEQ5 155 aaPredicted RBP7□□□□□ -1.29
HPS4-217ENST00000496385 OR13C6PQ8NH95 151 aa7□□□□□ -1.29
HPS4-217ENST00000496385 BAALCQ8WXS3 180 aa7□□□□□ -1.29
HPS4-217ENST00000496385 UBE2WQ96B02 151 aa7□□□□□ -1.29
HPS4-217ENST00000496385 TMEM101Q96IK0 257 aa7□□□□□ -1.29
HPS4-217ENST00000496385 BAHCC1Q9P281 2608 aa7□□□□□ -1.29
HPS4-217ENST00000496385 UQCRQO14949 82 aa7□□□□□ -1.29
HPS4-217ENST00000496385 NDUFA7O95182 113 aa7□□□□□ -1.29
HPS4-217ENST00000496385 IGHV1-2P23083 117 aa7□□□□□ -1.29
HPS4-217ENST00000496385 GRNP28799 593 aaKnown RBP7□□□□□ -1.29
HPS4-217ENST00000496385 RPL27AP46776 148 aaKnown RBP7□□□□□ -1.29
HPS4-217ENST00000496385 ADIPOQQ15848 244 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms