RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 Q8TAT8 98 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 SFT2D1Q8WV19 159 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 PYGO2Q9BRQ0 406 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 ATG101Q9BSB4 218 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 HSPG2P98160 4391 aa10.11□□□□□ -0.79
CXCL12-208ENST00000496375 PPT1P50897 306 aa10.11□□□□□ -0.79
CXCL12-208ENST00000496375 BTN1A1Q13410 526 aa10.11□□□□□ -0.79
CXCL12-208ENST00000496375 Q6AWC8 147 aa10.11□□□□□ -0.79
CXCL12-208ENST00000496375 ZNF493Q6ZR52 646 aa10.11□□□□□ -0.79
CXCL12-208ENST00000496375 RNASE8Q8TDE3 154 aaKnown RBP10.11□□□□□ -0.79
CXCL12-208ENST00000496375 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
CXCL12-208ENST00000496375 HIST1H2BAQ96A08 127 aa10.11□□□□□ -0.79
CXCL12-208ENST00000496375 LINC01587Q99440 93 aa10.11□□□□□ -0.79
CXCL12-208ENST00000496375 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 F5H768 121 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 K7EQM0 130 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 GPX1P07203 203 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 SRSF3P84103 164 aaKnown RBP10.1□□□□□ -0.79
CXCL12-208ENST00000496375 C1orf134Q5TEV5 83 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 TVP23CQ96ET8 276 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 C16orf74Q96GX8 76 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
CXCL12-208ENST00000496375 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
CXCL12-208ENST00000496375 MUC4Q99102 2169 aa10.09□□□□□ -0.79
CXCL12-208ENST00000496375 TRAV8-1A0A0A6YYK1 113 aa10.09□□□□□ -0.79
CXCL12-208ENST00000496375 PEX7O00628 323 aa10.09□□□□□ -0.79
CXCL12-208ENST00000496375 HTN1P15515 57 aa10.09□□□□□ -0.79
CXCL12-208ENST00000496375 FAM3BP58499 235 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-208ENST00000496375 UBE2G2P60604 165 aa10.09□□□□□ -0.79
CXCL12-208ENST00000496375 ANXA2RQ3ZCQ2 193 aa10.09□□□□□ -0.79
CXCL12-208ENST00000496375 KLF12Q9Y4X4 402 aa10.09□□□□□ -0.79
CXCL12-208ENST00000496375 TRBV6-1A0A0K0K1D8 114 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 J3KRW8 73 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 NUDT3O95989 172 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 ATP5G1P05496 136 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 SFTA3P0C7M3 94 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 RNASE4P34096 147 aaKnown RBP10.08□□□□□ -0.8
CXCL12-208ENST00000496375 ATP5G3P48201 142 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 FLI1Q01543 452 aaPredicted RBP10.08□□□□□ -0.8
CXCL12-208ENST00000496375 COX8CQ7Z4L0 72 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 EIF5A2Q9GZV4 153 aaKnown RBP10.08□□□□□ -0.8
CXCL12-208ENST00000496375 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 PSG8Q9UQ74 426 aa10.08□□□□□ -0.8
CXCL12-208ENST00000496375 A0A1B0GV50 99 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 CBY3A6NI87 242 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 PAGE4O60829 102 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 ADCYAP1P18509 176 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 TDRG1Q3Y452 100 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 ATRAIDQ6UW56 229 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 ZNF575Q86XF7 245 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 TXNDC17Q9BRA2 123 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
CXCL12-208ENST00000496375 TIMM8BQ9Y5J9 83 aaPredicted RBP10.07□□□□□ -0.8
CXCL12-208ENST00000496375 RBFOX3A6NFN3 312 aa10.06□□□□□ -0.8
CXCL12-208ENST00000496375 F6UZH7 168 aa10.06□□□□□ -0.8
CXCL12-208ENST00000496375 CCL20P78556 96 aa10.06□□□□□ -0.8
CXCL12-208ENST00000496375 IBA57Q5T440 356 aaKnown RBP10.06□□□□□ -0.8
CXCL12-208ENST00000496375 LINC00612Q8N6U2 182 aa10.06□□□□□ -0.8
CXCL12-208ENST00000496375 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.06□□□□□ -0.8
CXCL12-208ENST00000496375 C11orf72Q8NBR9 251 aa10.06□□□□□ -0.8
CXCL12-208ENST00000496375 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
CXCL12-208ENST00000496375 TP53TG3Q9ULZ0 132 aa10.06□□□□□ -0.8
CXCL12-208ENST00000496375 IGHV1OR15-1A0A075B7D0 117 aa10.05□□□□□ -0.8
CXCL12-208ENST00000496375 DAZ2Q13117 558 aaKnown RBP10.05□□□□□ -0.8
CXCL12-208ENST00000496375 SAPCD1Q5SSQ6 148 aa10.05□□□□□ -0.8
CXCL12-208ENST00000496375 CST9LP1Q5W188 147 aa10.05□□□□□ -0.8
CXCL12-208ENST00000496375 Q6ZQT7 251 aa10.05□□□□□ -0.8
CXCL12-208ENST00000496375 Q86TA4 180 aa10.05□□□□□ -0.8
CXCL12-208ENST00000496375 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
CXCL12-208ENST00000496375 FMC1Q96HJ9 113 aa10.05□□□□□ -0.8
CXCL12-208ENST00000496375 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
CXCL12-208ENST00000496375 DNAH5Q8TE73 4624 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 TRAV21A0A0B4J279 112 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 NBDYA0A0U1RRE5 68 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 CCL18P55774 89 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 TNP2Q05952 138 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 TMEM183BQ1AE95 376 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 CLRN3Q8NCR9 226 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 SGK494Q96LW2 274 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 LINC00479Q96M42 142 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 ZFP30Q9Y2G7 519 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
CXCL12-208ENST00000496375 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
CXCL12-208ENST00000496375 C9JQL5 133 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 LTAP01374 205 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 S100A9P06702 114 aaKnown RBP10.03□□□□□ -0.8
CXCL12-208ENST00000496375 TAGLN2P37802 199 aaKnown RBP10.03□□□□□ -0.8
CXCL12-208ENST00000496375 TCL1AP56279 114 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 SMUG1Q53HV7 270 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 ZNF506Q5JVG8 444 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 PRNTQ86SH4 94 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 C6orf223Q8N319 242 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 C18orf15Q96N68 181 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 C8orf49Q96NF6 230 aa10.03□□□□□ -0.8
CXCL12-208ENST00000496375 TRAV34A0A0B4J273 112 aa10.02□□□□□ -0.81
CXCL12-208ENST00000496375 NDUFS6O75380 124 aaKnown RBP10.02□□□□□ -0.81
CXCL12-208ENST00000496375 IFNA1P01562 189 aa10.02□□□□□ -0.81
CXCL12-208ENST00000496375 PFN1P07737 140 aaKnown RBP10.02□□□□□ -0.81
CXCL12-208ENST00000496375 ZNF80P51504 273 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms