RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 Q86TA4 180 aa12.23□□□□□ -0.45
RHBDD3-207ENST00000496342 SFT2D1Q8WV19 159 aa12.23□□□□□ -0.45
RHBDD3-207ENST00000496342 VSIG2Q96IQ7 327 aa12.23□□□□□ -0.45
RHBDD3-207ENST00000496342 ARL2-SNX15V9GYD0 113 aa12.23□□□□□ -0.45
RHBDD3-207ENST00000496342 DNAH10Q8IVF4 4471 aa12.23□□□□□ -0.45
RHBDD3-207ENST00000496342 SFTA3P0C7M3 94 aa12.22□□□□□ -0.45
RHBDD3-207ENST00000496342 TPT1P13693 172 aaKnown RBP12.22□□□□□ -0.45
RHBDD3-207ENST00000496342 TDRG1Q3Y452 100 aa12.22□□□□□ -0.45
RHBDD3-207ENST00000496342 C18orf15Q96N68 181 aa12.22□□□□□ -0.45
RHBDD3-207ENST00000496342 PAGE4O60829 102 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 RNF212Q495C1 297 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 SMUG1Q53HV7 270 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 CST9LP1Q5W188 147 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 STOML3Q8TAV4 291 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 MBD3L1Q8WWY6 194 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 SDF2L1Q9HCN8 221 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 LINC00588Q9Y4M8 146 aa12.21□□□□□ -0.45
RHBDD3-207ENST00000496342 FRAS1Q86XX4 4008 aa12.21□□□□□ -0.46
RHBDD3-207ENST00000496342 UMAD1C9J7I0 102 aa12.2□□□□□ -0.46
RHBDD3-207ENST00000496342 C1QBP02746 253 aa12.2□□□□□ -0.46
RHBDD3-207ENST00000496342 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
RHBDD3-207ENST00000496342 ZFP69Q49AA0 526 aa12.2□□□□□ -0.46
RHBDD3-207ENST00000496342 ZNF479Q96JC4 524 aa12.2□□□□□ -0.46
RHBDD3-207ENST00000496342 PFN1P07737 140 aaKnown RBP12.19□□□□□ -0.46
RHBDD3-207ENST00000496342 EIF5AP63241 154 aaKnown RBP12.19□□□□□ -0.46
RHBDD3-207ENST00000496342 A0A096LPF7 62 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 A0A1B0GVG6 124 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 H2AFB1P0C5Y9 115 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 FHL2Q14192 279 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 AKAP14Q86UN6 197 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 ZNRF2Q8NHG8 242 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 HIST1H2BAQ96A08 127 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 ZC2HC1AQ96GY0 325 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 SPXQ9BT56 116 aa12.18□□□□□ -0.46
RHBDD3-207ENST00000496342 SCO2A0A1W2PP80 73 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 PPT1P50897 306 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 CCL20P78556 96 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 SAPCD1Q5SSQ6 148 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 DPPA3Q6W0C5 159 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 Q6ZR54 194 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 RASL10AQ92737 203 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 KCNS1Q96KK3 526 aa12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 NKX6-2Q9C056 277 aaPredicted RBP12.17□□□□□ -0.46
RHBDD3-207ENST00000496342 IGKV3D-20A0A0C4DH25 116 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 M0R2P5 195 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 AKR1C3P42330 323 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 CRIP1P50238 77 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 CCL18P55774 89 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 ESRGQ1W209 222 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 NHLRC2Q8NBF2 726 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 BIRC6Q9NR09 4857 aa12.16□□□□□ -0.46
RHBDD3-207ENST00000496342 TRGV4A0A0C4DH28 118 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 C9JCJ5 164 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 RTL8CO15255 209 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 PAX4O43316 350 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 CRYBA4P53673 196 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 UBE2G1P62253 170 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 C9orf62Q8N4C0 152 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 C9orf85Q96MD7 179 aa12.15□□□□□ -0.46
RHBDD3-207ENST00000496342 H3BNG1 76 aa12.14□□□□□ -0.47
RHBDD3-207ENST00000496342 SH2D1AO60880 128 aa12.14□□□□□ -0.47
RHBDD3-207ENST00000496342 FMC1Q96HJ9 113 aa12.14□□□□□ -0.47
RHBDD3-207ENST00000496342 PRO0255Q9UI72 69 aa12.14□□□□□ -0.47
RHBDD3-207ENST00000496342 TRAV4A0A0B4J268 109 aa12.13□□□□□ -0.47
RHBDD3-207ENST00000496342 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
RHBDD3-207ENST00000496342 M0R036 132 aa12.13□□□□□ -0.47
RHBDD3-207ENST00000496342 SULT1A2P50226 295 aa12.13□□□□□ -0.47
RHBDD3-207ENST00000496342 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
RHBDD3-207ENST00000496342 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
RHBDD3-207ENST00000496342 HHLA3Q9XRX5 114 aa12.13□□□□□ -0.47
RHBDD3-207ENST00000496342 LOC100131303A0A0U1RQF7 123 aa12.12□□□□□ -0.47
RHBDD3-207ENST00000496342 LTAP01374 205 aa12.12□□□□□ -0.47
RHBDD3-207ENST00000496342 ZNF506Q5JVG8 444 aa12.12□□□□□ -0.47
RHBDD3-207ENST00000496342 SLC51BQ86UW2 128 aa12.12□□□□□ -0.47
RHBDD3-207ENST00000496342 ICOSQ9Y6W8 199 aa12.12□□□□□ -0.47
RHBDD3-207ENST00000496342 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 GRIFINA4D1Z8 144 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 FABP5P3A8MUU1 101 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 ORM1P02763 201 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 NKX2-5P52952 324 aaPredicted RBP12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 FAM3BP58499 235 aaPredicted RBP12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
RHBDD3-207ENST00000496342 TMSB15BA0A087X1C1 80 aa12.1□□□□□ -0.47
RHBDD3-207ENST00000496342 TRBV6-1A0A0K0K1D8 114 aa12.1□□□□□ -0.47
RHBDD3-207ENST00000496342 NBDYA0A0U1RRE5 68 aa12.1□□□□□ -0.47
RHBDD3-207ENST00000496342 B4DEV8 164 aa12.1□□□□□ -0.47
RHBDD3-207ENST00000496342 H3BVH4 76 aa12.1□□□□□ -0.47
RHBDD3-207ENST00000496342 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
RHBDD3-207ENST00000496342 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
RHBDD3-207ENST00000496342 DNAH2Q9P225 4427 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 KRBOX1C9JBD0 128 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 K7EQD1 137 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 GYPEP15421 78 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 ASIPP42127 132 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms