RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 COL25A1Q9BXS0 654 aaPredicted RBP9.93□□□□□ -0.82
PTPN7-217ENST00000495688 KLK9Q9UKQ9 250 aa9.93□□□□□ -0.82
PTPN7-217ENST00000495688 TRBV7-1A0A0A6YYK4 115 aa9.92□□□□□ -0.82
PTPN7-217ENST00000495688 K7ERJ3 54 aa9.92□□□□□ -0.82
PTPN7-217ENST00000495688 ATP5G2Q06055 141 aa9.92□□□□□ -0.82
PTPN7-217ENST00000495688 C9orf47Q6ZRZ4 202 aa9.92□□□□□ -0.82
PTPN7-217ENST00000495688 U3KQE9 123 aa9.92□□□□□ -0.82
PTPN7-217ENST00000495688 CSPG4Q6UVK1 2322 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 DPM2O94777 84 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 LY6DQ14210 128 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 CHAC1Q9BUX1 264 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 IGKV3-7A0A075B6H7 116 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 TRAV41A0A0B4J266 112 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 K7EP34 96 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 M0R381 172 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 LAGE3Q14657 143 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 SMIM15Q7Z3B0 74 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 GPHB5Q86YW7 130 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 KLK15Q9H2R5 256 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 ZANQ9Y493 2812 aa9.91□□□□□ -0.82
PTPN7-217ENST00000495688 GTF2H5Q6ZYL4 71 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 MAPKAPK5-AS1Q8N8E1 139 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 PIFOQ8TCI5 191 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 GLMPQ8WWB7 406 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 A0A1W2PPM0 123 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 F6UB75 175 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 C19orf84I3L1E1 186 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 MEGF9Q9H1U4 602 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 CENPEQ02224 2701 aa9.9□□□□□ -0.82
PTPN7-217ENST00000495688 IGHV3-11P01762 117 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 LCNL1Q6ZST4 164 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 MYOZ3Q8TDC0 251 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 SPCS1Q9Y6A9 102 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 ATP5LO75964 103 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 ARL3P36405 182 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 ITLN2Q8WWU7 325 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-217ENST00000495688 MRPL53Q96EL3 112 aaKnown RBP9.89□□□□□ -0.83
PTPN7-217ENST00000495688 K7ERU9 68 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 LY6EQ16553 131 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 ZFAND2AQ8N6M9 145 aa9.89□□□□□ -0.83
PTPN7-217ENST00000495688 UCNP55089 124 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 RPL39LQ96EH5 51 aaKnown RBP9.88□□□□□ -0.83
PTPN7-217ENST00000495688 CUBNO60494 3623 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 IGHV4-4A0A075B6R2 117 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 RPL11P62913 178 aaKnown RBP9.88□□□□□ -0.83
PTPN7-217ENST00000495688 C19orf54Q5BKX5 351 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 C14orf178Q8N769 122 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-217ENST00000495688 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 HIF1ANQ9NWT6 349 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 NHP2Q9NX24 153 aaKnown RBP9.88□□□□□ -0.83
PTPN7-217ENST00000495688 MOB4Q9Y3A3 225 aa9.88□□□□□ -0.83
PTPN7-217ENST00000495688 SRSF1Q07955 248 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPN7-217ENST00000495688 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
PTPN7-217ENST00000495688 C9orf139Q6ZV77 190 aa9.87□□□□□ -0.83
PTPN7-217ENST00000495688 SMIM2Q9BVW6 85 aa9.87□□□□□ -0.83
PTPN7-217ENST00000495688 SMPXQ9UHP9 88 aa9.87□□□□□ -0.83
PTPN7-217ENST00000495688 MUC4Q99102 2169 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 A0A087WX48 190 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 RIPPLY3P57055 190 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 Q6ZS46 218 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 RASL10AQ92737 203 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 GNRH2O43555 120 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 IGHV4-39P01824 125 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 SRD5A1P18405 259 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 S100A4P26447 101 aaKnown RBP9.86□□□□□ -0.83
PTPN7-217ENST00000495688 ANXA2RQ3ZCQ2 193 aa9.86□□□□□ -0.83
PTPN7-217ENST00000495688 PHLDA1Q8WV24 401 aaPredicted RBP9.86□□□□□ -0.83
PTPN7-217ENST00000495688 PKD1L2Q7Z442 2459 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 FAM223BA6NKX1 122 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-217ENST00000495688 IGHV4-38-2P0DP08 117 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 FABP2P12104 132 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 EDN2P20800 178 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
PTPN7-217ENST00000495688 FAM223AQ8IWN6 122 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 CEND1Q8N111 149 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 USP9YO00507 2555 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-217ENST00000495688 SOCS3O14543 225 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 OR10J6PQ8NGY7 276 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 SORL1Q92673 2214 aa9.85□□□□□ -0.83
PTPN7-217ENST00000495688 USP9XQ93008 2570 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-217ENST00000495688 DOPEY2Q9Y3R5 2298 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 IGHV1-69DA0A0B4J2H0 117 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 IGHV1-69P01742 117 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 MGPP08493 103 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 SUMO2P61956 95 aaKnown RBP9.84□□□□□ -0.83
PTPN7-217ENST00000495688 WFDC12Q8WWY7 111 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 PHLDA3Q9Y5J5 127 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 CREBBPQ92793 2442 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 IGHV4-61A0A0C4DH41 118 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 BLCAPP62952 87 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 NEGR1Q7Z3B1 354 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 MRAP2Q96G30 205 aa9.84□□□□□ -0.83
PTPN7-217ENST00000495688 LINC00477Q96M19 166 aa9.83□□□□□ -0.84
PTPN7-217ENST00000495688 SCGB3A1Q96QR1 104 aa9.83□□□□□ -0.84
PTPN7-217ENST00000495688 TM2D2Q9BX73 214 aa9.83□□□□□ -0.84
PTPN7-217ENST00000495688 TRAV21A0A0B4J279 112 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms