RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SAMD10Q9BYL1 202 aa12.23□□□□□ -0.45
CBX4-204ENST00000495122 TRAV21A0A0B4J279 112 aa12.22□□□□□ -0.45
CBX4-204ENST00000495122 GPX1P07203 203 aa12.22□□□□□ -0.45
CBX4-204ENST00000495122 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
CBX4-204ENST00000495122 PMCHP20382 165 aa12.22□□□□□ -0.45
CBX4-204ENST00000495122 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
CBX4-204ENST00000495122 CHCHD1Q96BP2 118 aaKnown RBP12.22□□□□□ -0.45
CBX4-204ENST00000495122 SSBP4Q9BWG4 385 aaPredicted RBP12.22□□□□□ -0.45
CBX4-204ENST00000495122 C2orf70A6NJV1 201 aa12.21□□□□□ -0.45
CBX4-204ENST00000495122 ZNF324O75467 553 aaPredicted RBP12.21□□□□□ -0.45
CBX4-204ENST00000495122 SYNJ2BPP57105 145 aa12.21□□□□□ -0.45
CBX4-204ENST00000495122 DPF1Q92782 380 aa12.21□□□□□ -0.45
CBX4-204ENST00000495122 K7EQG2 157 aa12.2□□□□□ -0.46
CBX4-204ENST00000495122 OR5AL1P0C617 328 aa12.2□□□□□ -0.46
CBX4-204ENST00000495122 CACNG7P62955 275 aa12.2□□□□□ -0.46
CBX4-204ENST00000495122 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
CBX4-204ENST00000495122 TMEM191AQ9H0A3 160 aa12.2□□□□□ -0.46
CBX4-204ENST00000495122 MS4A6AQ9H2W1 248 aa12.2□□□□□ -0.46
CBX4-204ENST00000495122 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 TMSB15BA0A087X1C1 80 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 G3V4G9 280 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 SNAI2O43623 268 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 NUPR1O60356 82 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 LEPP41159 167 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 BEAN1Q3B7T3 259 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 FAM104BQ5XKR9 115 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 U3KQK5 164 aa12.19□□□□□ -0.46
CBX4-204ENST00000495122 HSBP1O75506 76 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 DUSP14O95147 198 aaKnown RBP12.18□□□□□ -0.46
CBX4-204ENST00000495122 PPBPP02775 128 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 CD28P10747 220 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 AMTP48728 403 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 KPRPQ5T749 579 aaPredicted RBP12.18□□□□□ -0.46
CBX4-204ENST00000495122 SAMD5Q5TGI4 173 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 OR1N2Q8NGR9 330 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
CBX4-204ENST00000495122 IGKV3D-20A0A0C4DH25 116 aa12.17□□□□□ -0.46
CBX4-204ENST00000495122 ADARB2-AS1A8MUL3 147 aa12.17□□□□□ -0.46
CBX4-204ENST00000495122 NSUN5P1Q3KNT7 163 aa12.17□□□□□ -0.46
CBX4-204ENST00000495122 SMIM15Q7Z3B0 74 aa12.17□□□□□ -0.46
CBX4-204ENST00000495122 ZNF575Q86XF7 245 aa12.17□□□□□ -0.46
CBX4-204ENST00000495122 RCHY1Q96PM5 261 aa12.17□□□□□ -0.46
CBX4-204ENST00000495122 KLLNB2CW77 178 aa12.16□□□□□ -0.46
CBX4-204ENST00000495122 TSPOP30536 169 aa12.16□□□□□ -0.46
CBX4-204ENST00000495122 TWIST1Q15672 202 aa12.16□□□□□ -0.46
CBX4-204ENST00000495122 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
CBX4-204ENST00000495122 NDUFA11Q86Y39 141 aa12.16□□□□□ -0.46
CBX4-204ENST00000495122 ORMDL3Q8N138 153 aa12.16□□□□□ -0.46
CBX4-204ENST00000495122 CITED2Q99967 270 aaPredicted RBP12.16□□□□□ -0.46
CBX4-204ENST00000495122 GSN-AS1Q9NRJ2 163 aa12.16□□□□□ -0.46
CBX4-204ENST00000495122 A0A0J9YX75 114 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
CBX4-204ENST00000495122 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 FOXI2Q6ZQN5 318 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 NIT1Q86X76 327 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 KLHL30-AS1Q8NEE0 82 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 OR11H1Q8NG94 326 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 OR9G4Q8NGQ1 327 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 C11orf21Q9P2W6 132 aa12.15□□□□□ -0.46
CBX4-204ENST00000495122 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
CBX4-204ENST00000495122 NTF3P20783 257 aa12.14□□□□□ -0.47
CBX4-204ENST00000495122 Q6ZWC4 215 aa12.14□□□□□ -0.47
CBX4-204ENST00000495122 SIGLEC8Q9NYZ4 499 aa12.14□□□□□ -0.47
CBX4-204ENST00000495122 NAGKQ9UJ70 344 aa12.14□□□□□ -0.47
CBX4-204ENST00000495122 LINC00614P0C842 121 aa12.13□□□□□ -0.47
CBX4-204ENST00000495122 ASIPP42127 132 aa12.13□□□□□ -0.47
CBX4-204ENST00000495122 PKIAP61925 76 aa12.13□□□□□ -0.47
CBX4-204ENST00000495122 FHL3Q13643 280 aa12.13□□□□□ -0.47
CBX4-204ENST00000495122 PRR9Q5T870 116 aa12.13□□□□□ -0.47
CBX4-204ENST00000495122 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
CBX4-204ENST00000495122 TSSC4Q9Y5U2 329 aaPredicted RBP12.13□□□□□ -0.47
CBX4-204ENST00000495122 IGKV3-7A0A075B6H7 116 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 PCP4L1A6NKN8 68 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 TSTD3H0UI37 97 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 SCGB1D1O95968 90 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 SLURP1P55000 103 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 PSMG4Q5JS54 123 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 KHDC1LQ5JSQ8 128 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 PRELID3AQ96N28 172 aa12.12□□□□□ -0.47
CBX4-204ENST00000495122 A8MTW9 85 aa12.11□□□□□ -0.47
CBX4-204ENST00000495122 M0R2Z0 102 aa12.11□□□□□ -0.47
CBX4-204ENST00000495122 ZNF688P0C7X2 276 aa12.11□□□□□ -0.47
CBX4-204ENST00000495122 ZNF705DP0CH99 300 aaPredicted RBP12.11□□□□□ -0.47
CBX4-204ENST00000495122 ZNF705BP0CI00 300 aaPredicted RBP12.11□□□□□ -0.47
CBX4-204ENST00000495122 EDN2P20800 178 aa12.11□□□□□ -0.47
CBX4-204ENST00000495122 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
CBX4-204ENST00000495122 MRPL51Q4U2R6 128 aaKnown RBP12.11□□□□□ -0.47
CBX4-204ENST00000495122 C7orf71A4D174 169 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 CSN3P07498 182 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 RNASE4P34096 147 aaKnown RBP12.1□□□□□ -0.47
CBX4-204ENST00000495122 OXLD1Q5BKU9 147 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 ADAMTSL5Q6ZMM2 481 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 WFDC3Q8IUB2 231 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 DYNLRB2Q8TF09 96 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 SCRT2Q9NQ03 307 aa12.1□□□□□ -0.47
CBX4-204ENST00000495122 OR4C46A6NHA9 309 aa12.09□□□□□ -0.47
CBX4-204ENST00000495122 D6R8Y8 96 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms