RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SMIM3Q9BZL3 60 aa15.69■□□□□ 0.1
COL27A1-208ENST00000494780 INAFM2P0DMQ5 153 aa15.68■□□□□ 0.1
COL27A1-208ENST00000494780 TIRAPP58753 221 aa15.68■□□□□ 0.1
COL27A1-208ENST00000494780 PQLC2Q6ZP29 291 aa15.68■□□□□ 0.1
COL27A1-208ENST00000494780 GOLT1AQ6ZVE7 132 aa15.68■□□□□ 0.1
COL27A1-208ENST00000494780 EIF3GO75821 320 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL27A1-208ENST00000494780 IFITM3Q01628 133 aa15.67■□□□□ 0.1
COL27A1-208ENST00000494780 ACOT6Q3I5F7 207 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-208ENST00000494780 FRZBQ92765 325 aa15.67■□□□□ 0.1
COL27A1-208ENST00000494780 KCNS1Q96KK3 526 aa15.67■□□□□ 0.1
COL27A1-208ENST00000494780 MARVELD1Q9BSK0 173 aa15.67■□□□□ 0.1
COL27A1-208ENST00000494780 SDF2L1Q9HCN8 221 aa15.67■□□□□ 0.1
COL27A1-208ENST00000494780 LOC100131303A0A0U1RQF7 123 aa15.66■□□□□ 0.1
COL27A1-208ENST00000494780 TYMSP04818 313 aa15.66■□□□□ 0.1
COL27A1-208ENST00000494780 GATA1P15976 413 aaPredicted RBP15.66■□□□□ 0.1
COL27A1-208ENST00000494780 GCSHP23434 173 aa15.66■□□□□ 0.1
COL27A1-208ENST00000494780 TVP23CQ96ET8 276 aa15.66■□□□□ 0.1
COL27A1-208ENST00000494780 TREM1Q9NP99 234 aa15.66■□□□□ 0.1
COL27A1-208ENST00000494780 A0A1W2PPV4 95 aa15.65■□□□□ 0.1
COL27A1-208ENST00000494780 F6UZH7 168 aa15.65■□□□□ 0.1
COL27A1-208ENST00000494780 SSNA1O43805 119 aa15.65■□□□□ 0.1
COL27A1-208ENST00000494780 Q5VSD8 79 aa15.65■□□□□ 0.1
COL27A1-208ENST00000494780 NHLRC2Q8NBF2 726 aa15.65■□□□□ 0.1
COL27A1-208ENST00000494780 TRAV8-1A0A0A6YYK1 113 aa15.64■□□□□ 0.09
COL27A1-208ENST00000494780 IGHV3-38A0A0C4DH36 116 aa15.64■□□□□ 0.09
COL27A1-208ENST00000494780 WFDC1Q9HC57 220 aa15.64■□□□□ 0.09
COL27A1-208ENST00000494780 PPT1P50897 306 aa15.63■□□□□ 0.09
COL27A1-208ENST00000494780 ASB13Q8WXK3 278 aa15.63■□□□□ 0.09
COL27A1-208ENST00000494780 BOLA1Q9Y3E2 137 aa15.63■□□□□ 0.09
COL27A1-208ENST00000494780 FBLL1A6NHQ2 334 aaKnown RBP15.62■□□□□ 0.09
COL27A1-208ENST00000494780 CIDEAO60543 219 aa15.62■□□□□ 0.09
COL27A1-208ENST00000494780 PFN1P07737 140 aaKnown RBP15.62■□□□□ 0.09
COL27A1-208ENST00000494780 RAB2AP61019 212 aa15.62■□□□□ 0.09
COL27A1-208ENST00000494780 GNG5P63218 68 aa15.62■□□□□ 0.09
COL27A1-208ENST00000494780 LINC01556Q5JQF7 62 aa15.62■□□□□ 0.09
COL27A1-208ENST00000494780 SERTM2A0A1B0GWG4 89 aa15.61■□□□□ 0.09
COL27A1-208ENST00000494780 PSCAO43653 123 aa15.61■□□□□ 0.09
COL27A1-208ENST00000494780 NDFIP1Q9BT67 221 aa15.61■□□□□ 0.09
COL27A1-208ENST00000494780 TRAV8-6A0A0B4J262 113 aa15.6■□□□□ 0.09
COL27A1-208ENST00000494780 OR10G9Q8NGN4 311 aa15.6■□□□□ 0.09
COL27A1-208ENST00000494780 OR10G7Q8NGN6 311 aa15.6■□□□□ 0.09
COL27A1-208ENST00000494780 NTN5Q8WTR8 489 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-208ENST00000494780 PRADC1Q9BSG0 188 aa15.6■□□□□ 0.09
COL27A1-208ENST00000494780 DMBT1Q9UGM3 2413 aaPredicted RBP15.6■□□□□ 0.09
COL27A1-208ENST00000494780 LRCOL1A6NCL2 159 aa15.59■□□□□ 0.09
COL27A1-208ENST00000494780 IBA57-AS1B1ANH7 110 aa15.59■□□□□ 0.09
COL27A1-208ENST00000494780 HMGB3O15347 200 aaKnown RBP15.59■□□□□ 0.09
COL27A1-208ENST00000494780 RS1O15537 224 aa15.59■□□□□ 0.09
COL27A1-208ENST00000494780 ZNF876PQ49A33 203 aa15.59■□□□□ 0.09
COL27A1-208ENST00000494780 SLC25A29Q8N8R3 303 aa15.59■□□□□ 0.09
COL27A1-208ENST00000494780 IGLV5-52A0A0A0MRZ9 124 aa15.58■□□□□ 0.08
COL27A1-208ENST00000494780 TRBV6-4A0A1B0GX49 114 aa15.58■□□□□ 0.08
COL27A1-208ENST00000494780 RHOHQ15669 191 aa15.58■□□□□ 0.08
COL27A1-208ENST00000494780 CFAP126Q5VTH2 177 aa15.58■□□□□ 0.08
COL27A1-208ENST00000494780 FAT1Q14517 4588 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 TAAR5O14804 337 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 ARL14EPLP0DKL9 152 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 DEFA1P59665 94 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 DEFA3P59666 94 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 OR10J3Q5JRS4 329 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 C5orf17Q8NAS9 161 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 SGK494Q96LW2 274 aa15.57■□□□□ 0.08
COL27A1-208ENST00000494780 SMR3BP02814 79 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-208ENST00000494780 TCRAP04437 139 aa15.56■□□□□ 0.08
COL27A1-208ENST00000494780 STAG3L2P0CL84 134 aa15.56■□□□□ 0.08
COL27A1-208ENST00000494780 STAG3L3P0CL85 134 aa15.56■□□□□ 0.08
COL27A1-208ENST00000494780 CDC34P49427 236 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-208ENST00000494780 PTH2Q96A98 100 aa15.56■□□□□ 0.08
COL27A1-208ENST00000494780 TMEM70Q9BUB7 260 aa15.56■□□□□ 0.08
COL27A1-208ENST00000494780 C11orf21Q9P2W6 132 aa15.56■□□□□ 0.08
COL27A1-208ENST00000494780 HERC1Q15751 4861 aa15.55■□□□□ 0.08
COL27A1-208ENST00000494780 K7EQM0 130 aa15.55■□□□□ 0.08
COL27A1-208ENST00000494780 ZNF80P51504 273 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-208ENST00000494780 LELP1Q5T871 98 aa15.55■□□□□ 0.08
COL27A1-208ENST00000494780 DPPA3Q6W0C5 159 aa15.55■□□□□ 0.08
COL27A1-208ENST00000494780 SUN5Q8TC36 379 aa15.55■□□□□ 0.08
COL27A1-208ENST00000494780 C9orf85Q96MD7 179 aa15.55■□□□□ 0.08
COL27A1-208ENST00000494780 GCGP01275 180 aa15.54■□□□□ 0.08
COL27A1-208ENST00000494780 OR2G3Q8NGZ4 309 aa15.54■□□□□ 0.08
COL27A1-208ENST00000494780 Q9HAA7 133 aa15.54■□□□□ 0.08
COL27A1-208ENST00000494780 PSG8Q9UQ74 426 aa15.54■□□□□ 0.08
COL27A1-208ENST00000494780 FAM229AH3BQW9 127 aa15.53■□□□□ 0.08
COL27A1-208ENST00000494780 Q8N814 137 aa15.53■□□□□ 0.08
COL27A1-208ENST00000494780 VPS13BQ7Z7G8 4022 aa15.53■□□□□ 0.08
COL27A1-208ENST00000494780 IGHV3-73A0A0B4J1V6 119 aa15.52■□□□□ 0.08
COL27A1-208ENST00000494780 MGST1P10620 155 aaKnown RBP15.52■□□□□ 0.08
COL27A1-208ENST00000494780 GCHFRP30047 84 aa15.52■□□□□ 0.08
COL27A1-208ENST00000494780 ZFP69Q49AA0 526 aa15.52■□□□□ 0.08
COL27A1-208ENST00000494780 ZNF506Q5JVG8 444 aa15.52■□□□□ 0.08
COL27A1-208ENST00000494780 RAB24Q969Q5 203 aa15.52■□□□□ 0.08
COL27A1-208ENST00000494780 GTSF1LQ9H1H1 148 aa15.52■□□□□ 0.08
COL27A1-208ENST00000494780 PGPEP1LA6NFU8 196 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 IGLV2-11P01706 119 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 IGHV3-30P01768 117 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 IGHV3-33P01772 117 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 IGHV3-30-3P0DP02 117 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 IGHV3-30-5P0DP03 117 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 FLI1Q01543 452 aaPredicted RBP15.51■□□□□ 0.07
COL27A1-208ENST00000494780 SMUG1Q53HV7 270 aa15.51■□□□□ 0.07
COL27A1-208ENST00000494780 HSD17B11Q8NBQ5 300 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms