RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 HIST2H2BDQ6DRA6 164 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 ZFP82Q8N141 532 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 LINC00482Q8N8I6 264 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 WFDC9Q8NEX5 89 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 MRPL18Q9H0U6 180 aaKnown RBP5.03□□□□□ -1.6
MSH5-217ENST00000494458 C19orf73Q9NVV2 129 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 HLA-DRB4X5D2U9 266 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 OR4C46A6NHA9 309 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 SNURFLB1AK76 121 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 CRXO43186 299 aaPredicted RBP5.02□□□□□ -1.61
MSH5-217ENST00000494458 ARMS2P0C7Q2 107 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 ZNF688P0C7X2 276 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 LEPP41159 167 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 CMC4P56277 68 aaPredicted RBP5.02□□□□□ -1.61
MSH5-217ENST00000494458 LINC00310P59036 64 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 SLAQ13239 276 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 RIGQ13278 110 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 ODF3L2Q3SX64 289 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 PSMG4Q5JS54 123 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 KHDC1LQ5JSQ8 128 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 MRPL54Q6P161 138 aaKnown RBP5.02□□□□□ -1.61
MSH5-217ENST00000494458 LYZL1Q6UWQ5 148 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 Q6ZQT7 251 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 WFDC3Q8IUB2 231 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.02□□□□□ -1.61
MSH5-217ENST00000494458 C11orf44Q8N8P7 122 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 PGLYRP4Q96LB8 373 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 PACRGQ96M98 296 aaPredicted RBP5.02□□□□□ -1.61
MSH5-217ENST00000494458 LINC00467Q9BRT7 94 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 U3KQK5 164 aa5.02□□□□□ -1.61
MSH5-217ENST00000494458 SETD2Q9BYW2 2564 aaPredicted RBP5.01□□□□□ -1.61
MSH5-217ENST00000494458 IGKV3-7A0A075B6H7 116 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 NXPH4O95158 308 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 APCSP02743 223 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 ORM1P02763 201 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 S100A8P05109 93 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 GPX1P07203 203 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 TSPOP30536 169 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 CDKN1BP46527 198 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 INSL3P51460 131 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 KIR3DS1Q14943 382 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 OR10J3Q5JRS4 329 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 HIST3H2BBQ8N257 126 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 DEFB125Q8N687 156 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 POM121L12Q8N7R1 296 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 FER1L6-AS1Q8NA97 138 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 ALKBH7Q9BT30 221 aaPredicted RBP5.01□□□□□ -1.61
MSH5-217ENST00000494458 TMEM191AQ9H0A3 160 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 MAP6D1Q9H9H5 199 aa5.01□□□□□ -1.61
MSH5-217ENST00000494458 NIPBLQ6KC79 2804 aaeCLIP5.01□□□□□ -1.61
MSH5-217ENST00000494458 LOC102724200A0A096LPH7 203 aaPredicted RBP5□□□□□ -1.61
MSH5-217ENST00000494458 A0A1W2PRX2 142 aa5□□□□□ -1.61
MSH5-217ENST00000494458 C7orf71A4D174 169 aa5□□□□□ -1.61
MSH5-217ENST00000494458 RBMY1BA6NDE4 496 aaKnown RBP5□□□□□ -1.61
MSH5-217ENST00000494458 RBMY1EA6NEQ0 496 aaKnown RBP5□□□□□ -1.61
MSH5-217ENST00000494458 SPINK4O60575 86 aa5□□□□□ -1.61
MSH5-217ENST00000494458 S100A6P06703 90 aa5□□□□□ -1.61
MSH5-217ENST00000494458 RBMY1DP0C7P1 496 aaKnown RBP5□□□□□ -1.61
MSH5-217ENST00000494458 RNASE3P12724 160 aaKnown RBP5□□□□□ -1.61
MSH5-217ENST00000494458 TFPI2P48307 235 aa5□□□□□ -1.61
MSH5-217ENST00000494458 NDUFA6P56556 154 aa5□□□□□ -1.61
MSH5-217ENST00000494458 DEFB131AP59861 70 aa5□□□□□ -1.61
MSH5-217ENST00000494458 ANXA2RQ3ZCQ2 193 aa5□□□□□ -1.61
MSH5-217ENST00000494458 GFI1BQ5VTD9 330 aa5□□□□□ -1.61
MSH5-217ENST00000494458 FAM104BQ5XKR9 115 aa5□□□□□ -1.61
MSH5-217ENST00000494458 DYNLRB2Q8TF09 96 aa5□□□□□ -1.61
MSH5-217ENST00000494458 KCNS1Q96KK3 526 aa5□□□□□ -1.61
MSH5-217ENST00000494458 C20orf144Q9BQM9 153 aa5□□□□□ -1.61
MSH5-217ENST00000494458 SELENOKQ9Y6D0 94 aa5□□□□□ -1.61
MSH5-217ENST00000494458 SORL1Q92673 2214 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 PRSS47A8MTI9 375 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 NUPR1O60356 82 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 CD33P20138 364 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 NTF3P20783 257 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 RNASE4P34096 147 aaKnown RBP4.99□□□□□ -1.61
MSH5-217ENST00000494458 CACNG7P62955 275 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 PIK3CD-AS1Q5SR53 167 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 TRPT1Q86TN4 253 aaKnown RBP4.99□□□□□ -1.61
MSH5-217ENST00000494458 C18orf32Q8TCD1 76 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 PTH2Q96A98 100 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 RNF185Q96GF1 192 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 C9orf85Q96MD7 179 aa4.99□□□□□ -1.61
MSH5-217ENST00000494458 TENM1Q9UKZ4 2725 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 IGHV3-16A0A0C4DH30 117 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 GRIFINA4D1Z8 144 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 LINC01546A6NGU7 62 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 KNCNA6PVL3 124 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 GNRH2O43555 120 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 AMBPP02760 352 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 GIG44P09565 113 aaPredicted RBP4.98□□□□□ -1.61
MSH5-217ENST00000494458 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
MSH5-217ENST00000494458 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 RAB4AP20338 218 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 SRIP30626 198 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 CAMPP49913 170 aa4.98□□□□□ -1.61
MSH5-217ENST00000494458 RBMY1FQ15415 496 aaKnown RBP4.98□□□□□ -1.61
MSH5-217ENST00000494458 NSUN5P1Q3KNT7 163 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms