RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HLA-DRB4X5D2U9 266 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 GLI3P10071 1580 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 THOC2Q8NI27 1593 aaKnown RBP0.99□□□□□ -2.25
LMNB1-207ENST00000494185 ICE1Q9Y2F5 2266 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 SBF1O95248 1867 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 NUP210LQ5VU65 1888 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 CCDC88BA6NC98 1476 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 MLH3Q9UHC1 1453 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 TROQ12816 1431 aaPredicted RBP0.98□□□□□ -2.25
LMNB1-207ENST00000494185 STRCQ7RTU9 1775 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 UBR2Q8IWV8 1755 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 CHD3Q12873 2000 aaKnown RBP0.98□□□□□ -2.25
LMNB1-207ENST00000494185 KDM5AP29375 1690 aaKnown RBP0.98□□□□□ -2.25
LMNB1-207ENST00000494185 DSPPQ9NZW4 1301 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 TRPM1Q7Z4N2 1603 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 AKAP11Q9UKA4 1901 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 A0A087WSZ3 146 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 A0A087WXM4 84 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 RBAKDNA6NC62 111 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 C2orf70A6NJV1 201 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 F8W1H4 67 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 UQCRQO14949 82 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 HYPMO75409 117 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 SFT2D2O95562 160 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 TRACP01848 142 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 IGLC2P0DOY2 106 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 IGLC3P0DOY3 106 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 FABP2P12104 132 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 SSR2P43308 183 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 DSCR4P56555 118 aaPredicted RBP0.98□□□□□ -2.25
LMNB1-207ENST00000494185 WFDC2Q14508 124 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 BVES-AS1Q5T3Y7 98 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 OR2T2Q6IF00 324 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 COA5Q86WW8 74 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 OR2T35Q8NGX2 323 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 C10orf105Q8TEF2 133 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 DIRC1Q969H9 104 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 PRELID3AQ96N28 172 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 BANF2Q9H503 90 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 UQCR10Q9UDW1 63 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 SNRNP200O75643 2136 aaKnown RBP0.98□□□□□ -2.25
LMNB1-207ENST00000494185 POLA1P09884 1462 aaPredicted RBP0.98□□□□□ -2.25
LMNB1-207ENST00000494185 ERVK-7P63135 1459 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 TCOF1Q13428 1488 aaKnown RBP0.98□□□□□ -2.25
LMNB1-207ENST00000494185 CCDC88CQ9P219 2028 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 PHLPP1O60346 1717 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 CASKIN1Q8WXD9 1431 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 UACAQ9BZF9 1416 aa0.98□□□□□ -2.25
LMNB1-207ENST00000494185 ALPK3Q96L96 1907 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 OBSL1O75147 1896 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 VWDEQ8N2E2 1590 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 FBN1P35555 2871 aaKnown RBP0.97□□□□□ -2.25
LMNB1-207ENST00000494185 ZFHX2Q9C0A1 2572 aaPredicted RBP0.97□□□□□ -2.25
LMNB1-207ENST00000494185 TRAV3A0A0B4J244 114 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 C3orf85A0A1B0GTC6 90 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 C7orf77A4D0Y5 90 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MCRIP1C9JLW8 97 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 E7EUB6 86 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 H3BRM9 83 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 APOC4-APOC2K7ER74 178 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 K7ERJ3 54 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SIX6O95475 246 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 CYB5AP00167 134 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 IGLV1-51P01701 117 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 HBDP02042 147 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 APOC2P02655 101 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MT-ND6P03923 174 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 CD3DP04234 171 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 LINC00032P0C843 101 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SLC25A4P12235 298 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 COX7CP15954 63 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 CBLN1P23435 193 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SNCAP37840 140 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SNRPD3P62318 126 aaKnown RBP0.97□□□□□ -2.25
LMNB1-207ENST00000494185 DEFB103AP81534 67 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MRPS36P82909 103 aaKnown RBP0.97□□□□□ -2.25
LMNB1-207ENST00000494185 PCOTHQ58A44 107 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 NMSQ5H8A3 153 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 C9orf153Q5TBE3 101 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MIC13Q5XKP0 118 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SLC25A26Q70HW3 274 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 FAM216BQ8N7L0 139 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MORN4Q8NDC4 146 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 ATP6V0E2Q8NHE4 81 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 VSTM2AQ8TAG5 236 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 C4orf3Q8WVX3 66 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 CHCHD1Q96BP2 118 aaKnown RBP0.97□□□□□ -2.25
LMNB1-207ENST00000494185 MUCL1Q96DR8 90 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 S100A16Q96FQ6 103 aaKnown RBP0.97□□□□□ -2.25
LMNB1-207ENST00000494185 Q96M85 177 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 DSCR8Q96T75 97 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 RETNLBQ9BQ08 111 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SPANXDQ9BXN6 97 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 CYSTM1Q9H1C7 97 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SLC35B3Q9H1N7 401 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 NAA60Q9H7X0 242 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 CACFD1Q9UGQ2 172 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 SERP1Q9Y6X1 66 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 HEATR5AQ86XA9 2040 aa0.97□□□□□ -2.25
LMNB1-207ENST00000494185 TNRC6AQ8NDV7 1962 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms