RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 MAPKAPK5-AS1Q8N8E1 139 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IFI27L1Q96BM0 104 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZC2HC1AQ96GY0 325 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 TMEM191AQ9H0A3 160 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 CXXC4Q9H2H0 198 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF442Q9H7R0 627 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 MRPL16Q9NX20 251 aaKnown RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 DEC1Q9P2X7 70 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 RBM7Q9Y580 266 aaKnown RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 ARHGAP32A7KAX9 2087 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A087WW49 117 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A0B4J2C4 111 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A0G2JLM5 398 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGHV5-10-1A0A0J9YXX1 117 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 OXTP01178 125 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IFITM1P13164 125 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 ERCC8Q13216 396 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IBA57Q5T440 356 aaKnown RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM104BQ5XKR9 115 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC25A34Q6PIV7 304 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR8I2Q8N0Y5 310 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 GAFA1Q96PS6 74 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 LINC00467Q9BRT7 94 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 SAMD10Q9BYL1 202 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 OTORQ9NRC9 128 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 PRNDQ9UKY0 176 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 EPDR1Q9UM22 224 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 SIGLEC9Q9Y336 463 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 BRWD1Q9NSI6 2320 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 CLPSL1A2RUU4 121 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGLV1-47P01700 117 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 TCRAP04437 139 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC25A5P05141 298 aaKnown RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 CCL3P10147 92 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 HINT1P49773 126 aaPredicted RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC35B1P78383 322 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 WT1-ASQ06250 92 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 HCP5Q6MZN7 132 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 AMN1Q8IY45 258 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 TSTD1Q8NFU3 115 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 GALMQ96C23 342 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 EMC6Q9BV81 110 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 HRASLS2Q9NWW9 162 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 B4GALT7Q9UBV7 327 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 ATRXP46100 2492 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 GON4LQ3T8J9 2241 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 MUC4Q99102 2169 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 G6PCP35575 357 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 KRTDAPP60985 99 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 RPS18P62269 152 aaKnown RBP1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 GNG3P63215 75 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM222AQ5U5X8 452 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 NUP37Q8NFH4 326 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 SPANXDQ9BXN6 97 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 IMUPQ9GZP8 106 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 C19orf25Q9UFG5 118 aaPredicted RBP1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 SACSQ9NZJ4 4579 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 TRBV19A0A075B6N1 114 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 TRBV25-1A0A075B6N4 114 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 TRBV6-5A0A0K0K1A5 114 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 LOC100131303A0A0U1RQF7 123 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 H3BP45 60 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 K7ERU9 68 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 MOSP00540 346 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 LINC00694P0DN24 101 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 LEPP41159 167 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 INSL3P51460 131 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 HSPE1P61604 102 aaKnown RBP1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 RPL8P62917 257 aaKnown RBP1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF816Q0VGE8 651 aaPredicted RBP1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 SS18Q15532 418 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 BAGE3Q86Y29 109 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 SCGB1C1Q8TD33 95 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 ARPC1AQ92747 370 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 NABP2Q9BQ15 211 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 PRORYQ9H606 182 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 SPANXCQ9NY87 97 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
CDC42EP3-205ENST00000494083 A6NDN8 102 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 HIGD1CA8MV81 97 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 SAA2P0DJI9 122 aaPredicted RBP1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 MIC13Q5XKP0 118 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 GTSCR1Q86UQ5 136 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 C15orf53Q8NAA6 179 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 LINC00479Q96M42 142 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM103A1Q9BTL3 118 aaKnown RBP1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 MDFIC2A0A1B0GVS7 189 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 TMEM30CPA0ZSE6 113 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 HMGB3O15347 200 aaKnown RBP1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 APOMO95445 188 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 LGALS1P09382 135 aaKnown RBP1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 CRYGAP11844 174 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 FCER1GP30273 86 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 ASIPP42127 132 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 HERV-K104P61576 105 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 SAMD13Q5VXD3 122 aa1.84□□□□□ -2.11
CDC42EP3-205ENST00000494083 RNF5Q99942 180 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms