RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SVEP1Q4LDE5 3571 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 IGKV2-40A0A087WW87 121 aaPredicted RBP4.57□□□□□ -1.68
CPSF7-213ENST00000494016 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.57□□□□□ -1.68
CPSF7-213ENST00000494016 IGHV3-66A0A0C4DH42 116 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 A0A1W2PS18 150 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 J3QLI3 93 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 CHEK1O14757 476 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 ZNF207O43670 478 aaKnown RBP4.57□□□□□ -1.68
CPSF7-213ENST00000494016 SERF1AO75920 110 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 IGKV2D-40P01614 121 aaPredicted RBP4.57□□□□□ -1.68
CPSF7-213ENST00000494016 TRBV12-3P01733 135 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 GPX1P07203 203 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 SRIP30626 198 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 S100A7P31151 101 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 CSN1S1P47710 185 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 CFHR3Q02985 330 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 LOXL1Q08397 574 aaPredicted RBP4.57□□□□□ -1.68
CPSF7-213ENST00000494016 KLF5Q13887 457 aaPredicted RBP4.57□□□□□ -1.68
CPSF7-213ENST00000494016 DEFB112Q30KQ8 113 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 C1orf194Q5T5A4 169 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 SUMO4Q6EEV6 95 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 CD164L2Q6UWJ8 174 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 ATP5L2Q7Z4Y8 100 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 BAGE3Q86Y29 109 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 GATD1Q8NB37 220 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 MAPK1IP1LQ8NDC0 245 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 WFDC11Q8NEX6 87 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 OR5R1Q8NH85 324 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 USMG5Q96IX5 58 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 SMR3AQ99954 134 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 FOXC2Q99958 501 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 AAMDCQ9H7C9 122 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 ZNF580Q9UK33 172 aa4.57□□□□□ -1.68
CPSF7-213ENST00000494016 CR1P17927 2039 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 IGHV3OR16-13A0A075B7E8 117 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 IGHV3-49A0A0A0MS15 119 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 IGHV3-74A0A0B4J1X5 117 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 FBLL1A6NHQ2 334 aaKnown RBP4.56□□□□□ -1.68
CPSF7-213ENST00000494016 H3BUA1 57 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 M0QZK8 103 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 VCYO14598 125 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 SH2D1AO60880 128 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 IGHV4-59P01825 116 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 IGHV4-31P0DP07 118 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 ZNF80P51504 273 aaPredicted RBP4.56□□□□□ -1.68
CPSF7-213ENST00000494016 SUMO2P61956 95 aaKnown RBP4.56□□□□□ -1.68
CPSF7-213ENST00000494016 ERCC8Q13216 396 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 DEFB113Q30KQ7 82 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 HIST2H2BDQ6DRA6 164 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 C18orf32Q8TCD1 76 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 URB1-AS1Q96HZ7 61 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 RCHY1Q96PM5 261 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 TLN2Q9Y4G6 2542 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 CUBNO60494 3623 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 FN1P02751 2386 aaKnown RBP4.56□□□□□ -1.68
CPSF7-213ENST00000494016 ATRQ13535 2644 aa4.56□□□□□ -1.68
CPSF7-213ENST00000494016 CSPG4Q6UVK1 2322 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 RBAKDNA6NC62 111 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 NDUFA4O00483 81 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 SPRY2O43597 315 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 CSN3P07498 182 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 TPPP2P59282 170 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 HBBP68871 147 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 UNQ9165/PRO28630Q6UXU0 137 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 NIT1Q86X76 327 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 ZNF664Q8N3J9 261 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 RNF182Q8N6D2 247 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 Q8N976 141 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 OR4X2Q8NGF9 303 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 MRPL53Q96EL3 112 aaKnown RBP4.55□□□□□ -1.68
CPSF7-213ENST00000494016 METTL26Q96S19 204 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 NDFIP1Q9BT67 221 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 AGPAT4-IT1Q9H0P7 198 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 PRO1933Q9H354 126 aa4.55□□□□□ -1.68
CPSF7-213ENST00000494016 MXRA5Q9NR99 2828 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 LOC102724200A0A096LPH7 203 aaPredicted RBP4.54□□□□□ -1.68
CPSF7-213ENST00000494016 A0A1B0GUT8 65 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 TMEM189A5PLL7 270 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 IGHV3-11P01762 117 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 ARMS2P0C7Q2 107 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 NHLRC4P0CG21 123 aaPredicted RBP4.54□□□□□ -1.68
CPSF7-213ENST00000494016 PKIAP61925 76 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 RIGQ13278 110 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 FAM162BQ5T6X4 162 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 LYZL1Q6UWQ5 148 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 C9orf139Q6ZV77 190 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 GPHB5Q86YW7 130 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 Q8TAT8 98 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 SLC50A1Q9BRV3 221 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 NRN1Q9NPD7 142 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 NAGKQ9UJ70 344 aa4.54□□□□□ -1.68
CPSF7-213ENST00000494016 TMSB15BA0A087X1C1 80 aa4.53□□□□□ -1.68
CPSF7-213ENST00000494016 A0A0G2JLM5 398 aa4.53□□□□□ -1.68
CPSF7-213ENST00000494016 A0A1B0GW15 77 aa4.53□□□□□ -1.68
CPSF7-213ENST00000494016 FABP5P3A8MUU1 101 aa4.53□□□□□ -1.68
CPSF7-213ENST00000494016 K7EMT4 169 aa4.53□□□□□ -1.68
CPSF7-213ENST00000494016 SOCS3O14543 225 aa4.53□□□□□ -1.68
CPSF7-213ENST00000494016 ZNF324O75467 553 aaPredicted RBP4.53□□□□□ -1.68
CPSF7-213ENST00000494016 IGLC6P0CF74 106 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms