RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 IGHV4-4A0A075B6R2 117 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 TMEM213A2RRL7 107 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 HOXD3P31249 432 aaPredicted RBP7.56□□□□□ -1.2
PRPF3-206ENST00000493553 TWIST1Q15672 202 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 YAE1D1Q9NRH1 226 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 TP53TG3Q9ULZ0 132 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 U3KQK5 164 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 UNC79Q9P2D8 2635 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 CR1P17927 2039 aa7.56□□□□□ -1.2
PRPF3-206ENST00000493553 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 TRAV25A0A0B4J276 109 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 C20orf202A1L168 122 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 PPP1R17O96001 155 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 LINC00614P0C842 121 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 ZNF80P51504 273 aaPredicted RBP7.55□□□□□ -1.2
PRPF3-206ENST00000493553 PMCHL1Q16048 86 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 RNASEKQ6P5S7 137 aaKnown RBP7.55□□□□□ -1.2
PRPF3-206ENST00000493553 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 NIT1Q86X76 327 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 C16orf95Q9H693 158 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 APCP25054 2843 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 ITPR3Q14573 2671 aa7.55□□□□□ -1.2
PRPF3-206ENST00000493553 MAP1AP78559 2803 aaPredicted RBP7.54□□□□□ -1.2
PRPF3-206ENST00000493553 DNAJC9-AS1A6NH13 148 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 C2orf70A6NJV1 201 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 K7EQG2 157 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 M0R2Z0 102 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 SNAI2O43623 268 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 CKS2P33552 79 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 ASIPP42127 132 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
PRPF3-206ENST00000493553 SYNJ2BPP57105 145 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 FHL2Q14192 279 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 PRSS3P2Q8NHM4 247 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 DCANP1Q8TF63 244 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 FAM19A4Q96LR4 140 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 PRELID3AQ96N28 172 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 MS4A6AQ9H2W1 248 aa7.54□□□□□ -1.2
PRPF3-206ENST00000493553 IGHV4OR15-8A0A075B7B6 117 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 A0A087WW49 117 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 NUPR1O60356 82 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
PRPF3-206ENST00000493553 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
PRPF3-206ENST00000493553 NTF3P20783 257 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 S100A4P26447 101 aaKnown RBP7.53□□□□□ -1.2
PRPF3-206ENST00000493553 SPANXN1Q5VSR9 72 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 FOXI2Q6ZQN5 318 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 Q6ZWC4 215 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 ZFAND2AQ8N6M9 145 aa7.53□□□□□ -1.2
PRPF3-206ENST00000493553 A0A1B0GUS0 222 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 OR4C46A6NHA9 309 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 KLLNB2CW77 178 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 NDUFA7O95182 113 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 BTF3P20290 206 aaKnown RBP7.52□□□□□ -1.21
PRPF3-206ENST00000493553 KRTDAPP60985 99 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 PSMG4Q5JS54 123 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 Q6ZSV7 163 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 OR9G4Q8NGQ1 327 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 OR10AG1Q8NH19 301 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 NXT2Q9NPJ8 142 aaKnown RBP7.52□□□□□ -1.21
PRPF3-206ENST00000493553 SIGLEC8Q9NYZ4 499 aa7.52□□□□□ -1.21
PRPF3-206ENST00000493553 IGKV3D-20A0A0C4DH25 116 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 A0A0J9YX75 114 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 TCF21O43680 179 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 LEPROTL1O95214 131 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 SRD5A1P18405 259 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 RNASE4P34096 147 aaKnown RBP7.51□□□□□ -1.21
PRPF3-206ENST00000493553 TCTEX1D4Q5JR98 221 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 DEFB125Q8N687 156 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 DYNLRB2Q8TF09 96 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 RCHY1Q96PM5 261 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 MAP1LC3AQ9H492 121 aa7.51□□□□□ -1.21
PRPF3-206ENST00000493553 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
PRPF3-206ENST00000493553 FLNAP21333 2647 aaKnown RBP7.51□□□□□ -1.21
PRPF3-206ENST00000493553 SONP18583 2426 aaKnown RBP7.5□□□□□ -1.21
PRPF3-206ENST00000493553 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 D6R8Y8 96 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 K7EMI3 77 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 G0S2P27469 103 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 HILS1P60008 231 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 DEFA6Q01524 100 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 TDRG1Q3Y452 100 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 MRPL51Q4U2R6 128 aaKnown RBP7.5□□□□□ -1.21
PRPF3-206ENST00000493553 KHDC1LQ5JSQ8 128 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 PET117Q6UWS5 81 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 MRPL52Q86TS9 123 aaKnown RBP7.5□□□□□ -1.21
PRPF3-206ENST00000493553 KLHL30-AS1Q8NEE0 82 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 OR11H1Q8NG94 326 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 SPAG8Q99932 426 aaPredicted RBP7.5□□□□□ -1.21
PRPF3-206ENST00000493553 C20orf144Q9BQM9 153 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 TMEM70Q9BUB7 260 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 MAP1LC3CQ9BXW4 147 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 PHLDA3Q9Y5J5 127 aa7.5□□□□□ -1.21
PRPF3-206ENST00000493553 HIVEP2P31629 2446 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms