RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 Q6AWC8 147 aa4.8□□□□□ -1.64
VPS52-219ENST00000493379 LINC00612Q8N6U2 182 aa4.8□□□□□ -1.64
VPS52-219ENST00000493379 HIST1H2BAQ96A08 127 aa4.8□□□□□ -1.64
VPS52-219ENST00000493379 TVP23CQ96ET8 276 aa4.8□□□□□ -1.64
VPS52-219ENST00000493379 PYGO2Q9BRQ0 406 aa4.8□□□□□ -1.64
VPS52-219ENST00000493379 MAP1LC3BQ9GZQ8 125 aa4.8□□□□□ -1.64
VPS52-219ENST00000493379 TMPRSS5Q9H3S3 457 aa4.8□□□□□ -1.64
VPS52-219ENST00000493379 TRAV12-2A0A075B6T6 113 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 IGKV2-40A0A087WW87 121 aaPredicted RBP4.79□□□□□ -1.64
VPS52-219ENST00000493379 C7orf71A4D174 169 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 NDUFS6O75380 124 aaKnown RBP4.79□□□□□ -1.64
VPS52-219ENST00000493379 IGKV2D-40P01614 121 aaPredicted RBP4.79□□□□□ -1.64
VPS52-219ENST00000493379 HBE1P02100 147 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 PPT1P50897 306 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 RRN3P1Q2M238 152 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 TMEM78Q5T7P6 136 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 GFI1BQ5VTD9 330 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 SUMO4Q6EEV6 95 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 TMEM75Q8N9X5 138 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 CMTM2Q8TAZ6 248 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 RNASE8Q8TDE3 154 aaKnown RBP4.79□□□□□ -1.64
VPS52-219ENST00000493379 SFT2D1Q8WV19 159 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 C18orf15Q96N68 181 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 TXNDC17Q9BRA2 123 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 ATG101Q9BSB4 218 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
VPS52-219ENST00000493379 YTHDF2Q9Y5A9 579 aaKnown RBP4.79□□□□□ -1.64
VPS52-219ENST00000493379 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 HMCN2Q8NDA2 5059 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 TEX48A0A1B0GUV7 120 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 LYRM9A8MSI8 78 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 C11orf94C9JXX5 98 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 AZU1P20160 251 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 FGF8P55075 233 aaPredicted RBP4.78□□□□□ -1.64
VPS52-219ENST00000493379 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 CCL20P78556 96 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 DAZ2Q13117 558 aaKnown RBP4.78□□□□□ -1.64
VPS52-219ENST00000493379 C12orf74Q32Q52 190 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 SAPCD1Q5SSQ6 148 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 GOLT1AQ6ZVE7 132 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 CYB561D1Q8N8Q1 229 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 C11orf72Q8NBR9 251 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 C11orf45Q8TAV5 145 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 LINC01587Q99440 93 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
VPS52-219ENST00000493379 CBY3A6NI87 242 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 ZNF705GA8MUZ8 300 aaPredicted RBP4.77□□□□□ -1.65
VPS52-219ENST00000493379 K7EQM0 130 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 PAGE4O60829 102 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 PRM2P04554 102 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 S100A9P06702 114 aaKnown RBP4.77□□□□□ -1.65
VPS52-219ENST00000493379 GPX1P07203 203 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 TCTAP57738 103 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 IBA57Q5T440 356 aaKnown RBP4.77□□□□□ -1.65
VPS52-219ENST00000493379 PRR9Q5T870 116 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 CEMP1Q6PRD7 247 aaPredicted RBP4.77□□□□□ -1.65
VPS52-219ENST00000493379 ZNF575Q86XF7 245 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 MAPKAPK5-AS1Q8N8E1 139 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 FAM213BQ8TBF2 198 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 TMEM263Q8WUH6 116 aaKnown RBP4.77□□□□□ -1.65
VPS52-219ENST00000493379 C16orf74Q96GX8 76 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 NIPSNAP3BQ9BS92 247 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 PSG8Q9UQ74 426 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 ZFP30Q9Y2G7 519 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 PKD1P98161 4303 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
VPS52-219ENST00000493379 DNAH17Q9UFH2 4485 aa4.77□□□□□ -1.65
VPS52-219ENST00000493379 TRAV8-1A0A0A6YYK1 113 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 NUPR2A6NF83 97 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 F6UZH7 168 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 PEX7O00628 323 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 DEFB4AO15263 64 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 LTAP01374 205 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 PRB4P10163 310 aaPredicted RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 RNASE4P34096 147 aaKnown RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 TAGLN2P37802 199 aaKnown RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 NKX2-5P52952 324 aaPredicted RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 GNG5P63218 68 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 FLI1Q01543 452 aaPredicted RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 BTN1A1Q13410 526 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 TMEM183BQ1AE95 376 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 FAM222AQ5U5X8 452 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 Q6ZQT7 251 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 Q8N1X5 172 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 EIF4E3Q8N5X7 224 aaKnown RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 Q8TAT8 98 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 PHLDA1Q8WV24 401 aaPredicted RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 C11orf52Q96A22 123 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 PTH2Q96A98 100 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 FAM210BQ96KR6 192 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 LINC00479Q96M42 142 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 TREM1Q9NP99 234 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 MANBALQ9NQG1 85 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 CELA1Q9UNI1 258 aa4.76□□□□□ -1.65
VPS52-219ENST00000493379 TIMM8BQ9Y5J9 83 aaPredicted RBP4.76□□□□□ -1.65
VPS52-219ENST00000493379 IGHV3OR16-12A0A075B7B8 117 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms