RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 GPX2P18283 190 aa2.23□□□□□ -2.05
VPS13A-212ENST00000493341 AKR1C3P42330 323 aa2.23□□□□□ -2.05
VPS13A-212ENST00000493341 PSG9Q00887 426 aa2.23□□□□□ -2.05
VPS13A-212ENST00000493341 OR5H6Q8NGV6 325 aa2.23□□□□□ -2.05
VPS13A-212ENST00000493341 POP5Q969H6 163 aaKnown RBP2.23□□□□□ -2.05
VPS13A-212ENST00000493341 PTPRDP23468 1912 aa2.23□□□□□ -2.05
VPS13A-212ENST00000493341 MYO7AQ13402 2215 aa2.23□□□□□ -2.05
VPS13A-212ENST00000493341 KIAA1549LQ6ZVL6 1849 aa2.23□□□□□ -2.05
VPS13A-212ENST00000493341 SPTBN5Q9NRC6 3674 aaKnown RBP2.22□□□□□ -2.05
VPS13A-212ENST00000493341 HELZP42694 1942 aaKnown RBP2.22□□□□□ -2.05
VPS13A-212ENST00000493341 DBIP07108 87 aaKnown RBP2.22□□□□□ -2.05
VPS13A-212ENST00000493341 CACNA1GO43497 2377 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 MEIKINA0A087WXM9 373 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 TRAV13-1A0A0B4J241 112 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 C9JAW5 83 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 TNFSF15O95150 251 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 PSPHP78330 225 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 LINC00311Q8N616 119 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 TAF9BQ9HBM6 251 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 HIGD1AQ9Y241 93 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 MYH10P35580 1976 aa2.22□□□□□ -2.05
VPS13A-212ENST00000493341 TECTAO75443 2155 aa2.21□□□□□ -2.05
VPS13A-212ENST00000493341 ANAPC1Q9H1A4 1944 aa2.21□□□□□ -2.05
VPS13A-212ENST00000493341 UNC80Q8N2C7 3258 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 EYSQ5T1H1 3165 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 TTC28Q96AY4 2481 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 TRBV7-6A0A0J9YX20 115 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 H3BMG7 143 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 DPM2O94777 84 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 IL9P15248 144 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 ROMO1P60602 79 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 Q1T7F1 81 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 SMIM21Q3B7S5 101 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 PRELID3AQ96N28 172 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 NIT2Q9NQR4 276 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 HSPB8Q9UJY1 196 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
VPS13A-212ENST00000493341 RTTNQ86VV8 2226 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 OR1I1O60431 355 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 RAB5CP51148 216 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 DEFB113Q30KQ7 82 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 TCTE3Q8IZS6 198 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 OR51A4Q8NGJ6 313 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 OR5D14Q8NGL3 314 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 CBLN4Q9NTU7 201 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 CDH23Q9H251 3354 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 IGKV2D-26A0A0A0MRZ7 120 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 A0A1B0GW64 132 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 OR2T8A6NH00 312 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 C2orf70A6NJV1 201 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 B4DSR2 109 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 M0R233 179 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 CDK5R1Q15078 307 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
VPS13A-212ENST00000493341 FAM216BQ8N7L0 139 aa2.2□□□□□ -2.06
VPS13A-212ENST00000493341 TRAV14DV4A0A0A6YYC5 116 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 C17orf112F2Z3M2 114 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 MT-ND4LP03901 98 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 CLECL1Q8IZS7 167 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 TMEM254Q8TBM7 123 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 SFT2D1Q8WV19 159 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 TCEAL4Q96EI5 215 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 AP1S3Q96PC3 154 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 MCEEQ96PE7 176 aa2.19□□□□□ -2.06
VPS13A-212ENST00000493341 FN1P02751 2386 aaKnown RBP2.19□□□□□ -2.06
VPS13A-212ENST00000493341 C5orf58C9J3I9 102 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 OR2H2O95918 312 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 SCTP09683 121 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 SNRPFP62306 86 aaKnown RBP2.18□□□□□ -2.06
VPS13A-212ENST00000493341 CCDC58Q4VC31 144 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 C1orf134Q5TEV5 83 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 ZNF720Q7Z2F6 126 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 COA5Q86WW8 74 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 OR4B1Q8NGF8 309 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 TMEM106BQ9NUM4 274 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 CALML5Q9NZT1 146 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 EML5Q05BV3 1969 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 A0A0C4DFX4 3053 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 TRBV27A0A0K0K1C4 114 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 BRS3P32247 399 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 CDK6Q00534 326 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 Q8N814 137 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 Q96M85 177 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 OR5AC2Q9NZP5 309 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 COPZ2Q9P299 210 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 HEATR5BQ9P2D3 2071 aa2.18□□□□□ -2.06
VPS13A-212ENST00000493341 TNRC6BQ9UPQ9 1833 aaKnown RBP2.18□□□□□ -2.06
VPS13A-212ENST00000493341 BAHCC1Q9P281 2608 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 FREM1Q5H8C1 2179 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 TRAV12-1A0A0B4J245 112 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 PVALEFA0A1B0GWK0 134 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 PAEPP09466 180 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 CXCL8P10145 99 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 FABP4P15090 132 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 CRYGSP22914 178 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 Q5XG85 94 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 HYLS1Q96M11 299 aa2.17□□□□□ -2.06
VPS13A-212ENST00000493341 TSC22D3Q99576 134 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms