RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CSNK1G2-AS1Q8NCQ2 148 aa9.73□□□□□ -0.85
MSH6-208ENST00000493177 RNASE7Q9H1E1 156 aaKnown RBP9.73□□□□□ -0.85
MSH6-208ENST00000493177 IGHV1OR15-1A0A075B7D0 117 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 A0A0J9YWU9 116 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 CBY3A6NI87 242 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 P01737 135 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 PNRC1Q12796 327 aaPredicted RBP9.72□□□□□ -0.85
MSH6-208ENST00000493177 ANXA2RQ3ZCQ2 193 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 IBA57Q5T440 356 aaKnown RBP9.72□□□□□ -0.85
MSH6-208ENST00000493177 ISOC2Q96AB3 205 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 RNF183Q96D59 192 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 PYGO2Q9BRQ0 406 aa9.72□□□□□ -0.85
MSH6-208ENST00000493177 TMEM189A5PLL7 270 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 CXorf65A6NEN9 183 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 ZNF705GA8MUZ8 300 aaPredicted RBP9.71□□□□□ -0.86
MSH6-208ENST00000493177 B4DEV8 164 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 GATCO43716 136 aaKnown RBP9.71□□□□□ -0.86
MSH6-208ENST00000493177 APOC3P02656 99 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 C10orf91Q5T1B1 145 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 C15orf54Q8N8G6 183 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 NUDT10Q8NFP7 164 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 OR11H2Q8NH07 326 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 NUDT11Q96G61 164 aa9.71□□□□□ -0.86
MSH6-208ENST00000493177 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
MSH6-208ENST00000493177 C19orf71A6NCJ1 209 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 RPL19P84098 196 aaKnown RBP9.7□□□□□ -0.86
MSH6-208ENST00000493177 RRN3P1Q2M238 152 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
MSH6-208ENST00000493177 FAM231DQ6ZW35 169 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 OR10G8Q8NGN5 311 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 SFRP2Q96HF1 295 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 KCNS1Q96KK3 526 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
MSH6-208ENST00000493177 IGKV3D-20A0A0C4DH25 116 aa9.69□□□□□ -0.86
MSH6-208ENST00000493177 GRIFINA4D1Z8 144 aa9.69□□□□□ -0.86
MSH6-208ENST00000493177 PRM2P04554 102 aa9.69□□□□□ -0.86
MSH6-208ENST00000493177 LINC01559Q495D7 138 aa9.69□□□□□ -0.86
MSH6-208ENST00000493177 RPP21Q9H633 154 aaKnown RBP9.69□□□□□ -0.86
MSH6-208ENST00000493177 OSTCQ9NRP0 149 aa9.69□□□□□ -0.86
MSH6-208ENST00000493177 TP53TG3Q9ULZ0 132 aa9.69□□□□□ -0.86
MSH6-208ENST00000493177 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
MSH6-208ENST00000493177 XKRY2A2RUG3 117 aa9.68□□□□□ -0.86
MSH6-208ENST00000493177 GNRH2O43555 120 aa9.68□□□□□ -0.86
MSH6-208ENST00000493177 TYMSP04818 313 aa9.68□□□□□ -0.86
MSH6-208ENST00000493177 S100A4P26447 101 aaKnown RBP9.68□□□□□ -0.86
MSH6-208ENST00000493177 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
MSH6-208ENST00000493177 LINC00467Q9BRT7 94 aa9.68□□□□□ -0.86
MSH6-208ENST00000493177 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
MSH6-208ENST00000493177 LCE6AA0A183 80 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 SMIM9A6NGZ8 99 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 MT-ND4LP03901 98 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 AZU1P20160 251 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 ASIPP42127 132 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 TDRG1Q3Y452 100 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 RNF212Q495C1 297 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 SVBPQ8N300 66 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 CLRN3Q8NCR9 226 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 NEU1Q99519 415 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 X6R8D5 127 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 DNAH7Q8WXX0 4024 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 TENM3Q9P273 2699 aa9.67□□□□□ -0.86
MSH6-208ENST00000493177 NUPR2A6NF83 97 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 PPP1R2P9O14990 202 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 SNAPINO95295 136 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 GZMBP10144 247 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 EMP1P54849 157 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 ZNF415Q09FC8 603 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 TMEM263Q8WUH6 116 aaKnown RBP9.66□□□□□ -0.86
MSH6-208ENST00000493177 ANAPC16Q96DE5 110 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 C16orf74Q96GX8 76 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 TPPP3Q9BW30 176 aa9.66□□□□□ -0.86
MSH6-208ENST00000493177 IGHV4-28A0A0C4DH34 117 aa9.65□□□□□ -0.86
MSH6-208ENST00000493177 SNURFLB1AK76 121 aa9.65□□□□□ -0.86
MSH6-208ENST00000493177 MIFP14174 115 aa9.65□□□□□ -0.86
MSH6-208ENST00000493177 RPS10P5Q9NQ39 176 aa9.65□□□□□ -0.86
MSH6-208ENST00000493177 GSN-AS1Q9NRJ2 163 aa9.65□□□□□ -0.86
MSH6-208ENST00000493177 MDFICQ9P1T7 246 aa9.65□□□□□ -0.86
MSH6-208ENST00000493177 V9GYV3 84 aa9.65□□□□□ -0.86
MSH6-208ENST00000493177 STAB2Q8WWQ8 2551 aa9.65□□□□□ -0.87
MSH6-208ENST00000493177 IGHV3-16A0A0C4DH30 117 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 C7orf77A4D0Y5 90 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 A8MWL6 223 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 H3BVH4 76 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 DEFB4AO15263 64 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 ATP6V1G1O75348 118 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 TCL1AP56279 114 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 RHEBQ15382 184 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 CT83Q5H943 113 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
MSH6-208ENST00000493177 KLK5Q9Y337 293 aaPredicted RBP9.64□□□□□ -0.87
MSH6-208ENST00000493177 CXCL1P09341 107 aa9.63□□□□□ -0.87
MSH6-208ENST00000493177 ARMS2P0C7Q2 107 aa9.63□□□□□ -0.87
MSH6-208ENST00000493177 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
MSH6-208ENST00000493177 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
MSH6-208ENST00000493177 RNASE8Q8TDE3 154 aaKnown RBP9.63□□□□□ -0.87
MSH6-208ENST00000493177 TSKUQ8WUA8 353 aa9.63□□□□□ -0.87
MSH6-208ENST00000493177 CTDSP1Q9GZU7 261 aa9.63□□□□□ -0.87
MSH6-208ENST00000493177 KMT2CQ8NEZ4 4911 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 321.5 ms