RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 MRPL23Q16540 153 aaKnown RBP7.91□□□□□ -1.14
LRTM1-202ENST00000493075 C5orf17Q8NAS9 161 aa7.91□□□□□ -1.14
LRTM1-202ENST00000493075 KCNS1Q96KK3 526 aa7.91□□□□□ -1.14
LRTM1-202ENST00000493075 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
LRTM1-202ENST00000493075 DNAH11Q96DT5 4516 aa7.91□□□□□ -1.14
LRTM1-202ENST00000493075 KIAA1109Q2LD37 5005 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 TRAV8-1A0A0A6YYK1 113 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 BORCS7-ASMTA0A0B4J1R7 106 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 IGHV3-16A0A0C4DH30 117 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 RNF222A6NCQ9 220 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.14
LRTM1-202ENST00000493075 K7EQM0 130 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 M0R2P5 195 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 GNRH2O43555 120 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 TCRAP04437 139 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 GNG5P63218 68 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 C8orf49Q96NF6 230 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 NDFIP1Q9BT67 221 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 KRTAP1-5Q9BYS1 174 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 EPDR1Q9UM22 224 aa7.9□□□□□ -1.14
LRTM1-202ENST00000493075 DYNC1H1Q14204 4646 aaKnown RBP7.9□□□□□ -1.14
LRTM1-202ENST00000493075 PKHD1P08F94 4074 aa7.9□□□□□ -1.15
LRTM1-202ENST00000493075 TRAV4A0A0B4J268 109 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 TRGV4A0A0C4DH28 118 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 SIVA1O15304 175 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 ORM1P02763 201 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 RPL7L1Q6DKI1 246 aaKnown RBP7.89□□□□□ -1.15
LRTM1-202ENST00000493075 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 NEGR1Q7Z3B1 354 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 OR2T35Q8NGX2 323 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 ZNF479Q96JC4 524 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 SH3BGRL3Q9H299 93 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 SDF2L1Q9HCN8 221 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 PSG8Q9UQ74 426 aa7.89□□□□□ -1.15
LRTM1-202ENST00000493075 FXYD6-FXYD2A0A087WZ82 144 aa7.88□□□□□ -1.15
LRTM1-202ENST00000493075 A0A1W2PRE2 83 aa7.88□□□□□ -1.15
LRTM1-202ENST00000493075 F6UZH7 168 aa7.88□□□□□ -1.15
LRTM1-202ENST00000493075 TAAR5O14804 337 aa7.88□□□□□ -1.15
LRTM1-202ENST00000493075 TYMSP04818 313 aa7.88□□□□□ -1.15
LRTM1-202ENST00000493075 RGS21Q2M5E4 152 aa7.88□□□□□ -1.15
LRTM1-202ENST00000493075 OR4C5Q8NGB2 326 aa7.88□□□□□ -1.15
LRTM1-202ENST00000493075 GGTLC3B5MD39 225 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 K7EP13 123 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 K7EQD1 137 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 CIDEAO60543 219 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 NXPH4O95158 308 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 IGLV2-11P01706 119 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 SFTA3P0C7M3 94 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 FLI1Q01543 452 aaPredicted RBP7.87□□□□□ -1.15
LRTM1-202ENST00000493075 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 ZNF575Q86XF7 245 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 TMEM75Q8N9X5 138 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 PTH2Q96A98 100 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 SGK494Q96LW2 274 aa7.87□□□□□ -1.15
LRTM1-202ENST00000493075 NKX6-2Q9C056 277 aaPredicted RBP7.87□□□□□ -1.15
LRTM1-202ENST00000493075 CTXND1A0A1B0GTU2 59 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 C9JCJ5 164 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 G3V3Q6 166 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 GCGP01275 180 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 PFN1P07737 140 aaKnown RBP7.86□□□□□ -1.15
LRTM1-202ENST00000493075 SRIP30626 198 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 ZNF80P51504 273 aaPredicted RBP7.86□□□□□ -1.15
LRTM1-202ENST00000493075 ZNF726P1Q15940 193 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 SMUG1Q53HV7 270 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 SH2D6Q7Z4S9 175 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 PCNPQ8WW12 178 aaKnown RBP7.86□□□□□ -1.15
LRTM1-202ENST00000493075 TXNDC17Q9BRA2 123 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 KRTAP17-1Q9BYP8 105 aa7.86□□□□□ -1.15
LRTM1-202ENST00000493075 TRAV9-2A0A087WT02 112 aa7.85□□□□□ -1.15
LRTM1-202ENST00000493075 C16orf90A8MZG2 172 aa7.85□□□□□ -1.15
LRTM1-202ENST00000493075 GYPEP15421 78 aa7.85□□□□□ -1.15
LRTM1-202ENST00000493075 ZFP69Q49AA0 526 aa7.85□□□□□ -1.15
LRTM1-202ENST00000493075 PRNTQ86SH4 94 aa7.85□□□□□ -1.15
LRTM1-202ENST00000493075 C11orf21Q9P2W6 132 aa7.85□□□□□ -1.15
LRTM1-202ENST00000493075 GATA1P15976 413 aaPredicted RBP7.84□□□□□ -1.15
LRTM1-202ENST00000493075 PPT1P50897 306 aa7.84□□□□□ -1.15
LRTM1-202ENST00000493075 TIRAPP58753 221 aa7.84□□□□□ -1.15
LRTM1-202ENST00000493075 LINC00315P59091 139 aa7.84□□□□□ -1.15
LRTM1-202ENST00000493075 AKR1C8PQ5T2L2 129 aa7.84□□□□□ -1.15
LRTM1-202ENST00000493075 Q6ZRN7 208 aaPredicted RBP7.84□□□□□ -1.15
LRTM1-202ENST00000493075 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
LRTM1-202ENST00000493075 CYTL1Q9NRR1 136 aa7.84□□□□□ -1.15
LRTM1-202ENST00000493075 MUC4Q99102 2169 aa7.84□□□□□ -1.15
LRTM1-202ENST00000493075 RS1O15537 224 aa7.83□□□□□ -1.16
LRTM1-202ENST00000493075 CDK2AP2O75956 126 aa7.83□□□□□ -1.16
LRTM1-202ENST00000493075 IFNA7P01567 189 aa7.83□□□□□ -1.16
LRTM1-202ENST00000493075 ZNF876PQ49A33 203 aa7.83□□□□□ -1.16
LRTM1-202ENST00000493075 NFE4Q86UQ8 179 aa7.83□□□□□ -1.16
LRTM1-202ENST00000493075 HIST1H2BAQ96A08 127 aa7.83□□□□□ -1.16
LRTM1-202ENST00000493075 LY96Q9Y6Y9 160 aa7.83□□□□□ -1.16
LRTM1-202ENST00000493075 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 FAM74A7A6NL05 159 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 FABP5P3A8MUU1 101 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 ARPC5O15511 151 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 DNAH10OSP0CZ25 163 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 PIK3CD-AS1Q5SR53 167 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 CFAP126Q5VTH2 177 aa7.82□□□□□ -1.16
LRTM1-202ENST00000493075 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms