RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 C9orf47Q6ZRZ4 202 aa10.52□□□□□ -0.72
PDZRN3-210ENST00000492909 ATP5L2Q7Z4Y8 100 aa10.52□□□□□ -0.72
PDZRN3-210ENST00000492909 RCHY1Q96PM5 261 aa10.52□□□□□ -0.72
PDZRN3-210ENST00000492909 AGPAT4-IT1Q9H0P7 198 aa10.52□□□□□ -0.72
PDZRN3-210ENST00000492909 EREGO14944 169 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 DEFB1P60022 68 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 CT83Q5H943 113 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 OR8A1Q8NGG7 326 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 Q8TAT8 98 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 NEU1Q99519 415 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
PDZRN3-210ENST00000492909 A0A1B0GXF2 115 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 C19orf71A6NCJ1 209 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 F6UB75 175 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 ZNF324O75467 553 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 AMTP48728 403 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 INSL3P51460 131 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 ZNF138P52744 262 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 HIST1H1AQ02539 215 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 Q8N976 141 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 C18orf32Q8TCD1 76 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 PRR25Q96S07 402 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 ASCL2Q99929 193 aa10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 RPP21Q9H633 154 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 ZNF256Q9Y2P7 627 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-210ENST00000492909 HIGD1CA8MV81 97 aa10.5□□□□□ -0.73
PDZRN3-210ENST00000492909 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
PDZRN3-210ENST00000492909 VAMP8Q9BV40 100 aa10.5□□□□□ -0.73
PDZRN3-210ENST00000492909 PPP1R14DQ9NXH3 145 aa10.5□□□□□ -0.73
PDZRN3-210ENST00000492909 VWFP04275 2813 aa10.5□□□□□ -0.73
PDZRN3-210ENST00000492909 TRRAPQ9Y4A5 3859 aa10.5□□□□□ -0.73
PDZRN3-210ENST00000492909 M0R143 59 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 PMCHP20382 165 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 DEFB131AP59861 70 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 KRTDAPP60985 99 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 C9orf66Q5T8R8 295 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 EBLN2Q6P2I7 272 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 MRPL52Q86TS9 123 aaKnown RBP10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 NIT1Q86X76 327 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 C8orf49Q96NF6 230 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 SNHG12Q9BXW3 62 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 A8MWL6 223 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 CT45A10P0DMU9 189 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 RAB4AP20338 218 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 TDRG1Q3Y452 100 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 LINC00322Q6ZN03 302 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 FOXI2Q6ZQN5 318 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 ZC2HC1AQ96GY0 325 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 MIEN1Q9BRT3 115 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 MCRIP2Q9BUT9 160 aaKnown RBP10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 LENEPQ9Y5L5 61 aa10.49□□□□□ -0.73
PDZRN3-210ENST00000492909 A0A0J9YX75 114 aa10.48□□□□□ -0.73
PDZRN3-210ENST00000492909 P01737 135 aa10.48□□□□□ -0.73
PDZRN3-210ENST00000492909 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
PDZRN3-210ENST00000492909 OR4B1Q8NGF8 309 aa10.48□□□□□ -0.73
PDZRN3-210ENST00000492909 ALKBH7Q9BT30 221 aaPredicted RBP10.48□□□□□ -0.73
PDZRN3-210ENST00000492909 GFRA4Q9GZZ7 299 aa10.48□□□□□ -0.73
PDZRN3-210ENST00000492909 AGRNO00468 2067 aa10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 FAM231BA6NCW3 169 aa10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 CAMPP49913 170 aa10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 HBBP68871 147 aa10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 ZNF705AQ6ZN79 300 aaPredicted RBP10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 DAZAP1Q96EP5 407 aaKnown RBP10.47□□□□□ -0.73
PDZRN3-210ENST00000492909 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.74
PDZRN3-210ENST00000492909 C3orf79P0CE67 100 aa10.46□□□□□ -0.74
PDZRN3-210ENST00000492909 CMC4P56277 68 aaPredicted RBP10.46□□□□□ -0.74
PDZRN3-210ENST00000492909 ODF3L2Q3SX64 289 aa10.46□□□□□ -0.74
PDZRN3-210ENST00000492909 GTSF1Q8WW33 167 aa10.46□□□□□ -0.74
PDZRN3-210ENST00000492909 BORCS7Q96B45 105 aa10.46□□□□□ -0.74
PDZRN3-210ENST00000492909 OR11H12B2RN74 326 aa10.45□□□□□ -0.74
PDZRN3-210ENST00000492909 BEAN1Q3B7T3 259 aa10.45□□□□□ -0.74
PDZRN3-210ENST00000492909 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
PDZRN3-210ENST00000492909 SSBP4Q9BWG4 385 aaPredicted RBP10.45□□□□□ -0.74
PDZRN3-210ENST00000492909 NOTCH3Q9UM47 2321 aa10.45□□□□□ -0.74
PDZRN3-210ENST00000492909 KNCNA6PVL3 124 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 HLA-DRB4P13762 266 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 NTF3P20783 257 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 CTRLP40313 264 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 CRIP1P50238 77 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 FAM162BQ5T6X4 162 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 PGLYRP4Q96LB8 373 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 FAM19A4Q96LR4 140 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 FAM110AQ9BQ89 295 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 HLA-DRB4X5D2U9 266 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 HSBP1O75506 76 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 ZNF124Q15973 351 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 APRG1Q8IVJ8 170 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 ZFAND2AQ8N6M9 145 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 OR2D3Q8NGH3 330 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 ODF3Q96PU9 254 aa10.44□□□□□ -0.74
PDZRN3-210ENST00000492909 H3BMM0 161 aa10.43□□□□□ -0.74
PDZRN3-210ENST00000492909 IGKV3-20P01619 116 aa10.43□□□□□ -0.74
PDZRN3-210ENST00000492909 IGLL1P15814 213 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms