RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 FNDC4Q9H6D8 234 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-213ENST00000492506 GEMIN7Q9H840 131 aaKnown RBP9.86□□□□□ -0.83
HDAC3-213ENST00000492506 TRAV26-1A0A087WT03 109 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 H3BUT2 72 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 PROP1O75360 226 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 CD7P09564 240 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
HDAC3-213ENST00000492506 KIR3DS1Q14943 382 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 C2orf91Q6ZV80 131 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 GALMQ96C23 342 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 GGTLC1Q9BX51 225 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 GTSF1LQ9H1H1 148 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 ZNF355PQ9NSJ1 428 aa9.85□□□□□ -0.83
HDAC3-213ENST00000492506 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.84□□□□□ -0.83
HDAC3-213ENST00000492506 RBMXL2O75526 392 aaKnown RBP9.84□□□□□ -0.83
HDAC3-213ENST00000492506 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 GATA2P23769 480 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-213ENST00000492506 ATP5IP56385 69 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-213ENST00000492506 FXYD3Q14802 87 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 H2BFWTQ7Z2G1 175 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 TTC9CQ8N5M4 171 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 ZNF502Q8TBZ5 544 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 DDB2Q92466 427 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 TECRQ9NZ01 308 aaKnown RBP9.84□□□□□ -0.83
HDAC3-213ENST00000492506 CYSLTR1Q9Y271 337 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 DNAH6Q9C0G6 4158 aa9.84□□□□□ -0.83
HDAC3-213ENST00000492506 A0A087X0K7 114 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 A0A1B0GXF2 115 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 C15orf62A8K5M9 175 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 SMIM13P0DJ93 91 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 CSN1S1P47710 185 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 LINC00205P59089 165 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 HBBP68871 147 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 SLAQ13239 276 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 S100A7AQ86SG5 101 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 OR4A5Q8NH83 315 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 NDFIP1Q9BT67 221 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 HIGD1BQ9P298 99 aa9.83□□□□□ -0.84
HDAC3-213ENST00000492506 IGHV1-24A0A0C4DH33 117 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 hDV102S1A0JD36 115 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 CNIH1O95406 144 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 MFAP2P55001 183 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 LINC01559Q495D7 138 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 IGF2BP2-AS1Q96M15 143 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 GPR82Q96P67 336 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 OVOL2Q9BRP0 275 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 MRPL32Q9BYC8 188 aaKnown RBP9.82□□□□□ -0.84
HDAC3-213ENST00000492506 GFRA4Q9GZZ7 299 aa9.82□□□□□ -0.84
HDAC3-213ENST00000492506 TEX48A0A1B0GUV7 120 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 A0A1B0GW15 77 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 CRYGBP07316 175 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 DEFB114Q30KQ6 69 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 TEX45Q8NA69 505 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 IL1F10Q8WWZ1 152 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 VGLL1Q99990 258 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 PEMTQ9UBM1 199 aa9.81□□□□□ -0.84
HDAC3-213ENST00000492506 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-213ENST00000492506 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 EDN2P20800 178 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 IZUMO4Q1ZYL8 232 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 MRGPRG-AS1Q2M3A8 158 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 LGALS9BQ3B8N2 356 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 LGALS9CQ6DKI2 356 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 TEPPQ6URK8 271 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 HSD17B10Q99714 261 aaKnown RBP9.8□□□□□ -0.84
HDAC3-213ENST00000492506 MGST2Q99735 147 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 THYN1Q9P016 225 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
HDAC3-213ENST00000492506 NUPR2A6NF83 97 aa9.79□□□□□ -0.84
HDAC3-213ENST00000492506 A8MWL6 223 aa9.79□□□□□ -0.84
HDAC3-213ENST00000492506 IGLV2-14P01704 120 aa9.79□□□□□ -0.84
HDAC3-213ENST00000492506 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
HDAC3-213ENST00000492506 KIR2DS2P43631 304 aa9.79□□□□□ -0.84
HDAC3-213ENST00000492506 RPS16P62249 146 aaKnown RBP9.79□□□□□ -0.84
HDAC3-213ENST00000492506 CEMP1Q6PRD7 247 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-213ENST00000492506 PDPNQ86YL7 162 aa9.79□□□□□ -0.84
HDAC3-213ENST00000492506 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
HDAC3-213ENST00000492506 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-213ENST00000492506 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-213ENST00000492506 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
HDAC3-213ENST00000492506 OR1A1Q9P1Q5 309 aa9.79□□□□□ -0.84
HDAC3-213ENST00000492506 IGLV2-8P01709 118 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 FGF6P10767 208 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 TCTAP57738 103 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 RPL8P62917 257 aaKnown RBP9.78□□□□□ -0.84
HDAC3-213ENST00000492506 TAL2Q16559 108 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 NUP35Q8NFH5 326 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 GPHA2Q96T91 129 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 ZNF492Q9P255 531 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 ERG28Q9UKR5 140 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 PKHD1P08F94 4074 aa9.78□□□□□ -0.84
HDAC3-213ENST00000492506 GAGE5Q13069 117 aa9.77□□□□□ -0.85
HDAC3-213ENST00000492506 GAGE6Q13070 117 aa9.77□□□□□ -0.85
HDAC3-213ENST00000492506 EIF4EBP1Q13541 118 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-213ENST00000492506 STPG3Q8N7X2 389 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms