RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	PRO0255	Q9UI72	69 aa		10.53	□□□□□ -0.72
MRPL55-231	ENST00000492170	TP53TG3	Q9ULZ0	132 aa		10.53	□□□□□ -0.72
MRPL55-231	ENST00000492170	TRBV7-9	A0A0J9YWB2	115 aa		10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	PGP	A6NDG6	321 aa		10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	DIRC3	C9JPN6	131 aa		10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	CSN1S1	P47710	185 aa		10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	ZNF138	P52744	262 aa		10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	EIF5A	P63241	154 aa	Known RBP	10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	FAM74A1	Q5RGS3	127 aa		10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170	HYLS1	Q96M11	299 aa		10.52	□□□□□ -0.73
MRPL55-231	ENST00000492170		A0A1B0GVG6	124 aa		10.51	□□□□□ -0.73
MRPL55-231	ENST00000492170	PFDN1	O60925	122 aa		10.51	□□□□□ -0.73
MRPL55-231	ENST00000492170		Q6ZRN7	208 aa	Predicted RBP	10.51	□□□□□ -0.73
MRPL55-231	ENST00000492170		Q8TAT8	98 aa		10.51	□□□□□ -0.73
MRPL55-231	ENST00000492170	SCRT2	Q9NQ03	307 aa		10.51	□□□□□ -0.73
MRPL55-231	ENST00000492170	UMAD1	C9J7I0	102 aa		10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170	EREG	O14944	169 aa		10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170	TPT1	P13693	172 aa	Known RBP	10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170	CRYBA4	P53673	196 aa		10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170	MRPL23	Q16540	153 aa	Known RBP	10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170		Q6ZQT7	251 aa		10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170	TMED6	Q8WW62	240 aa		10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170	C8orf49	Q96NF6	230 aa		10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170	HHLA3	Q9XRX5	114 aa		10.5	□□□□□ -0.73
MRPL55-231	ENST00000492170		A0A1W2PRE2	83 aa		10.49	□□□□□ -0.73
MRPL55-231	ENST00000492170	MAP1LC3B2	A6NCE7	125 aa		10.49	□□□□□ -0.73
MRPL55-231	ENST00000492170	GGTLC3	B5MD39	225 aa		10.49	□□□□□ -0.73
MRPL55-231	ENST00000492170	CMTM2	Q8TAZ6	248 aa		10.49	□□□□□ -0.73
MRPL55-231	ENST00000492170	MAP1LC3B	Q9GZQ8	125 aa		10.49	□□□□□ -0.73
MRPL55-231	ENST00000492170	LENEP	Q9Y5L5	61 aa		10.49	□□□□□ -0.73
MRPL55-231	ENST00000492170	TRGV4	A0A0C4DH28	118 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	SERTM2	A0A1B0GWG4	89 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	FHIT	P49789	147 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	FGF8	P55075	233 aa	Predicted RBP	10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	ERVFC1-1	P60608	527 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	FHL2	Q14192	279 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	MUC21	Q5SSG8	566 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	DPPA3	Q6W0C5	159 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	NEGR1	Q7Z3B1	354 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	NFE4	Q86UQ8	179 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	C5orf17	Q8NAS9	161 aa		10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	PCNP	Q8WW12	178 aa	Known RBP	10.48	□□□□□ -0.73
MRPL55-231	ENST00000492170	LYPD5	Q6UWN5	251 aa		10.47	□□□□□ -0.73
MRPL55-231	ENST00000492170	GOLT1A	Q6ZVE7	132 aa		10.47	□□□□□ -0.73
MRPL55-231	ENST00000492170	C9orf62	Q8N4C0	152 aa		10.47	□□□□□ -0.73
MRPL55-231	ENST00000492170	MBD3L1	Q8WWY6	194 aa		10.47	□□□□□ -0.73
MRPL55-231	ENST00000492170	PGPEP1	Q9NXJ5	209 aa		10.47	□□□□□ -0.73
MRPL55-231	ENST00000492170	TRGV11	A0A075B6L2	103 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	TRAV9-2	A0A087WT02	112 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	TCRA	P04437	139 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	SRI	P30626	198 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	SUMO1	P63165	101 aa	Known RBP	10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	GNG5	P63218	68 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170		Q6AWC8	147 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	CDPF1	Q6NVV7	123 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	FAM159A	Q6UWV7	190 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	SPX	Q9BT56	116 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	RPH3AL	Q9UNE2	315 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	LY96	Q9Y6Y9	160 aa		10.46	□□□□□ -0.73
MRPL55-231	ENST00000492170	FAM74A7	A6NL05	159 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	SFTA3	P0C7M3	94 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	TMEM183B	Q1AE95	376 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	ZFP69	Q49AA0	526 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	SLC51B	Q86UW2	128 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	IQCF2	Q8IXL9	164 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	TMEM183A	Q8IXX5	376 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	FAM213B	Q8TBF2	198 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	NKX6-2	Q9C056	277 aa	Predicted RBP	10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	MDFIC	Q9P1T7	246 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	EPDR1	Q9UM22	224 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	ARL2-SNX15	V9GYD0	113 aa		10.45	□□□□□ -0.74
MRPL55-231	ENST00000492170	TRAV8-1	A0A0A6YYK1	113 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170		K7EP13	123 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170		K7EQD1	137 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	ORM1	P02763	201 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	GYPE	P15421	78 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	EIF5AL1	Q6IS14	154 aa	Known RBP	10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	RASL10A	Q92737	203 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	TVP23C	Q96ET8	276 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	ZNF479	Q96JC4	524 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	NAGK	Q9UJ70	344 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	TNFRSF18	Q9Y5U5	241 aa		10.44	□□□□□ -0.74
MRPL55-231	ENST00000492170	IGLV2-11	P01706	119 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	EVI2A	P22794	236 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	RAB5C	P51148	216 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	UBE2G2	P60604	165 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	CYB561D1	Q8N8Q1	229 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	TMEM75	Q8N9X5	138 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	SFT2D1	Q8WV19	159 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	TXNDC17	Q9BRA2	123 aa		10.43	□□□□□ -0.74
MRPL55-231	ENST00000492170	TRAV4	A0A0B4J268	109 aa		10.42	□□□□□ -0.74
MRPL55-231	ENST00000492170	FBLL1	A6NHQ2	334 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-231	ENST00000492170		C9JCJ5	164 aa		10.42	□□□□□ -0.74
MRPL55-231	ENST00000492170		K7EQM0	130 aa		10.42	□□□□□ -0.74
MRPL55-231	ENST00000492170	SULT1A2	P50226	295 aa		10.42	□□□□□ -0.74
MRPL55-231	ENST00000492170	WFDC10B	Q8IUB3	73 aa		10.42	□□□□□ -0.74
MRPL55-231	ENST00000492170	MSRB1	Q9NZV6	116 aa		10.42	□□□□□ -0.74
MRPL55-231	ENST00000492170		A0A087WTM6	91 aa		10.41	□□□□□ -0.74
MRPL55-231	ENST00000492170	TRAV1-1	A0A0B4J248	108 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms