RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 HMGB3O15347 200 aaKnown RBP7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 GAGE7O76087 117 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 GAGE12FP0CL80 117 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 GAGE12GP0CL81 117 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 GAGE12IP0CL82 117 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 IGLC2P0DOY2 106 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 FUSP35637 526 aaKnown RBP eCLIP7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 GUK1Q16774 197 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 COMMD7Q86VX2 200 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 RNF182Q8N6D2 247 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 TXNDC17Q9BRA2 123 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 TMEM167BQ9NRX6 74 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 TRAV8-2A0A0B4J237 113 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 A0A1W2PRE2 83 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 C9JQL5 133 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 NXPH4O95158 308 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 HIST1H1EP10412 219 aaKnown RBP7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 BCL2P10415 239 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 PSG3Q16557 428 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 C10orf91Q5T1B1 145 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 DEFB104AQ8WTQ1 72 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 NTN5Q8WTR8 489 aaPredicted RBP7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 MANBALQ9NQG1 85 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 VAX2Q9UIW0 290 aa7.6□□□□□ -1.19
CLCNKA-206ENST00000491433 LRP2P98164 4655 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 A0A087X0K7 114 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 FAM74A7A6NL05 159 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 NPIPB6E9PJ23 425 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 H3BQ15 152 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 NDUFB4O95168 129 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 SRP19P09132 144 aaKnown RBP7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 NBEAP1P0C6P0 100 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 DNAH10OSP0CZ25 163 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 PYYP10082 97 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 DAZ2Q13117 558 aaKnown RBP7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 IGFL4Q6B9Z1 124 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 BPIFA4PQ86YQ2 179 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 PAXXQ9BUH6 204 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 ICOSQ9Y6W8 199 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 LY96Q9Y6Y9 160 aa7.59□□□□□ -1.19
CLCNKA-206ENST00000491433 TRGV2A0A075B6R0 118 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 IGLV5-52A0A0A0MRZ9 124 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 OR7C2O60412 319 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 PAGE4O60829 102 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 ZNF253O75346 499 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 IFNA1P01562 189 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 SLAQ13239 276 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 PDE6HQ13956 83 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 PEA15Q15121 130 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 ARL6IP6Q8N6S5 226 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 VSIG2Q96IQ7 327 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 NKX6-2Q9C056 277 aaPredicted RBP7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 MSRB1Q9NZV6 116 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 GNG13Q9P2W3 67 aa7.58□□□□□ -1.2
CLCNKA-206ENST00000491433 MUC2Q02817 5179 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 TRBV19A0A075B6N1 114 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 A0A1B0GV50 99 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 TMEM218A2RU14 115 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 TMEM250H0YL14 139 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 OR10J4P0C629 311 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 EVI2AP22794 236 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 MEF2BQ02080 365 aaPredicted RBP7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 TOR2AQ5JU69 321 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 C11orf52Q96A22 123 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 RPUSD4Q96CM3 377 aaKnown RBP7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 PYGO2Q9BRQ0 406 aa7.57□□□□□ -1.2
CLCNKA-206ENST00000491433 GGTLC3B5MD39 225 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 PAX4O43316 350 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 ASIPP42127 132 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 UBE2L3P68036 154 aaKnown RBP7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 MRPL23Q16540 153 aaKnown RBP7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 C10orf126Q8N4M7 172 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 LINC00467Q9BRT7 94 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 TCEAL7Q9BRU2 100 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 SLC50A1Q9BRV3 221 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 EIF5A2Q9GZV4 153 aaKnown RBP7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
CLCNKA-206ENST00000491433 FAT4Q6V0I7 4981 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 KRBOX1C9JBD0 128 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 PSCAO43653 123 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 ATP6V1G1O75348 118 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 ADCYAP1P18509 176 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 LEPP41159 167 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 GFI1BQ5VTD9 330 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 Q6ZTI0 123 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 SEC11CQ9BY50 192 aa7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 ZNF331Q9NQX6 463 aaPredicted RBP7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 CARHSP1Q9Y2V2 147 aaKnown RBP7.55□□□□□ -1.2
CLCNKA-206ENST00000491433 F6UZH7 168 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 PDE6DO43924 150 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 S100A1P23297 94 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 LYPD5Q6UWN5 251 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 NEGR1Q7Z3B1 354 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 ODF3Q96PU9 254 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 PRO0255Q9UI72 69 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 KLF12Q9Y4X4 402 aa7.54□□□□□ -1.2
CLCNKA-206ENST00000491433 TRGV1A0A0A0MS02 117 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms