RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 DEFA1P59665 94 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 DEFA3P59666 94 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 NFE4Q86UQ8 179 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 OR4C5Q8NGB2 326 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 TREM1Q9NP99 234 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 TRAV9-2A0A087WT02 112 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 A0A087WTM6 91 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 TRAV21A0A0B4J279 112 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 C9JCJ5 164 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 SGK494Q96LW2 274 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 TXNDC17Q9BRA2 123 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 MSRB1Q9NZV6 116 aa10.64□□□□□ -0.71
SMPD4-220ENST00000491319 ARL14EPLP0DKL9 152 aa10.63□□□□□ -0.71
SMPD4-220ENST00000491319 EVI2AP22794 236 aa10.63□□□□□ -0.71
SMPD4-220ENST00000491319 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
SMPD4-220ENST00000491319 ARL6IP6Q8N6S5 226 aa10.63□□□□□ -0.71
SMPD4-220ENST00000491319 OR10G9Q8NGN4 311 aa10.63□□□□□ -0.71
SMPD4-220ENST00000491319 OR10G7Q8NGN6 311 aa10.63□□□□□ -0.71
SMPD4-220ENST00000491319 SDF2L1Q9HCN8 221 aa10.63□□□□□ -0.71
SMPD4-220ENST00000491319 CDC34P49427 236 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-220ENST00000491319 CRYGDP07320 174 aa10.61□□□□□ -0.71
SMPD4-220ENST00000491319 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-220ENST00000491319 NHLRC2Q8NBF2 726 aa10.61□□□□□ -0.71
SMPD4-220ENST00000491319 HSD17B11Q8NBQ5 300 aa10.61□□□□□ -0.71
SMPD4-220ENST00000491319 ASB13Q8WXK3 278 aa10.61□□□□□ -0.71
SMPD4-220ENST00000491319 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
SMPD4-220ENST00000491319 ALG5Q9Y673 324 aa10.61□□□□□ -0.71
SMPD4-220ENST00000491319 K7EP13 123 aa10.6□□□□□ -0.71
SMPD4-220ENST00000491319 STAG3L2P0CL84 134 aa10.6□□□□□ -0.71
SMPD4-220ENST00000491319 STAG3L3P0CL85 134 aa10.6□□□□□ -0.71
SMPD4-220ENST00000491319 ZNF80P51504 273 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-220ENST00000491319 XGP55808 180 aa10.6□□□□□ -0.71
SMPD4-220ENST00000491319 KRTAP10-1P60331 282 aa10.6□□□□□ -0.71
SMPD4-220ENST00000491319 NDFIP1Q9BT67 221 aa10.6□□□□□ -0.71
SMPD4-220ENST00000491319 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
SMPD4-220ENST00000491319 FBLL1A6NHQ2 334 aaKnown RBP10.59□□□□□ -0.71
SMPD4-220ENST00000491319 EPM2AB3EWF7 344 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 TCRAP04437 139 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 GCHFRP30047 84 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 PPT1P50897 306 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 TMEM75Q8N9X5 138 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 OR2G3Q8NGZ4 309 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 RAB24Q969Q5 203 aa10.59□□□□□ -0.71
SMPD4-220ENST00000491319 SERTM2A0A1B0GWG4 89 aa10.58□□□□□ -0.72
SMPD4-220ENST00000491319 ZNF876PQ49A33 203 aa10.58□□□□□ -0.72
SMPD4-220ENST00000491319 DPPA3Q6W0C5 159 aa10.58□□□□□ -0.72
SMPD4-220ENST00000491319 SH2D6Q7Z4S9 175 aa10.58□□□□□ -0.72
SMPD4-220ENST00000491319 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
SMPD4-220ENST00000491319 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 GGTLC3B5MD39 225 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 GCGP01275 180 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 IGLV2-11P01706 119 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 TIRAPP58753 221 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 CFAP126Q5VTH2 177 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 SUN5Q8TC36 379 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 PSMG3Q9BT73 122 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-220ENST00000491319 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 PSG8Q9UQ74 426 aa10.57□□□□□ -0.72
SMPD4-220ENST00000491319 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
SMPD4-220ENST00000491319 RS1O15537 224 aa10.56□□□□□ -0.72
SMPD4-220ENST00000491319 LINC01556Q5JQF7 62 aa10.56□□□□□ -0.72
SMPD4-220ENST00000491319 ZNF506Q5JVG8 444 aa10.56□□□□□ -0.72
SMPD4-220ENST00000491319 AQP10Q96PS8 301 aa10.56□□□□□ -0.72
SMPD4-220ENST00000491319 K7EQM0 130 aa10.55□□□□□ -0.72
SMPD4-220ENST00000491319 TAAR5O14804 337 aa10.55□□□□□ -0.72
SMPD4-220ENST00000491319 PFN1P07737 140 aaKnown RBP10.55□□□□□ -0.72
SMPD4-220ENST00000491319 SUMO1P63165 101 aaKnown RBP10.55□□□□□ -0.72
SMPD4-220ENST00000491319 FLI1Q01543 452 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-220ENST00000491319 RHOHQ15669 191 aa10.55□□□□□ -0.72
SMPD4-220ENST00000491319 ZFP69Q49AA0 526 aa10.55□□□□□ -0.72
SMPD4-220ENST00000491319 PRNTQ86SH4 94 aa10.55□□□□□ -0.72
SMPD4-220ENST00000491319 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
SMPD4-220ENST00000491319 FAT1Q14517 4588 aa10.55□□□□□ -0.72
SMPD4-220ENST00000491319 TRBV6-4A0A1B0GX49 114 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 PGPEP1LA6NFU8 196 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 PSCAO43653 123 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
SMPD4-220ENST00000491319 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 OR10J3Q5JRS4 329 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 Q5VSD8 79 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 CYB561D1Q8N8Q1 229 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 TMEM167BQ9NRX6 74 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 EPDR1Q9UM22 224 aa10.54□□□□□ -0.72
SMPD4-220ENST00000491319 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 LRCOL1A6NCL2 159 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 CXorf1O96002 111 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 MBP02144 154 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 GCSHP23434 173 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 SERF2P84101 59 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 Q5BKY6 102 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 MED28Q9H204 178 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 Q9HAA7 133 aa10.53□□□□□ -0.72
SMPD4-220ENST00000491319 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.73
SMPD4-220ENST00000491319 CIDEAO60543 219 aa10.52□□□□□ -0.73
SMPD4-220ENST00000491319 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms