RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 BSPH1Q075Z2 132 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 LAGE3Q14657 143 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 C5orf64Q2M2E5 130 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 C12orf74Q32Q52 190 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM106AQ4KMX7 169 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 LDLRAD2Q5SZI1 272 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 ATP1A1-AS1Q5TC04 95 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 MINOS1Q5TGZ0 78 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 LINC00173Q6ZV60 143 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 C2orf91Q6ZV80 131 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 Q6ZVH6 145 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 KRTAP7-1Q8IUC3 87 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 CEND1Q8N111 149 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 DEFB123Q8N688 67 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 PRSS33Q8NF86 280 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 OR8A1Q8NGG7 326 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 ARPC1AQ92747 370 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 MRPL53Q96EL3 112 aaKnown RBP1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 ZC2HC1AQ96GY0 325 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 TIMD4Q96H15 378 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 C20orf78Q9BR46 151 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 SLC50A1Q9BRV3 221 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 FBXL15Q9H469 300 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 SPANXA1Q9NS26 97 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 C21orf62Q9NYP8 219 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 ONECUT1Q9UBC0 465 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 RPH3ALQ9UNE2 315 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 MINOS1-NBL1R4GNA1 71 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 HLA-DRB4X5D2U9 266 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 URB1O60287 2271 aaKnown RBP1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 LAMA1P25391 3075 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM186AA6NE01 2351 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 WDR87Q6ZQQ6 2873 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 FRYQ5TBA9 3013 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TECTAO75443 2155 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 AHCTF1Q8WYP5 2266 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 DNAH14Q0VDD8 3507 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TRBV20-1A0A075B6N2 111 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TRBV25-1A0A075B6N4 114 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A087WW49 117 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A096LNJ9 63 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV3-21A0A0B4J1V1 117 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV3-72A0A0B4J1Y9 119 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TRAV40A0A0B4J280 105 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TRBV7-9A0A0J9YWB2 115 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM213A2RRL7 107 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM8BA6NDV4 472 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 NCBP2LA6PVI3 153 aaKnown RBP1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLL5B9A064 214 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM238C9JI98 176 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 D6R8Y8 96 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM262E9PQX1 116 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 K7EP34 96 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 OVOL1O14753 267 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 SH2D1AO60880 128 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHG4P01861 327 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 IL4P05112 153 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV4-38-2P0DP08 117 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 CNTFRP26992 372 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 DSCR10P59022 87 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 RPL32P62910 135 aaKnown RBP1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 FBXL19-AS1Q494R0 122 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 ORMDL2Q53FV1 153 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 C10orf55Q5SWW7 151 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 DUX4L9Q6RFH8 374 aaPredicted RBP1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 SH2D6Q7Z4S9 175 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 LHFPL4Q7Z7J7 247 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 Q86TA4 180 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 DEFB124Q8NES8 71 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM158Q8WZ71 300 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 RAB37Q96AX2 223 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 MRAP2Q96G30 205 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 RNF185Q96GF1 192 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 SPANXDQ9BXN6 97 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 AGPAT4-IT1Q9H0P7 198 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 DYNLRB1Q9NP97 96 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNRD1Q9P1U0 126 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 CTSZQ9UBR2 303 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TIMM8BQ9Y5J9 83 aaPredicted RBP1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 SPCS1Q9Y6A9 102 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 TRIOO75962 3097 aa1.54□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLV2-18A0A075B6J9 118 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TRAV21A0A0B4J279 112 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 MYMXA0A1B0GTQ4 84 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 SPAARA0A1B0GVQ0 90 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A1B0GWB2 263 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A1W2PRD5 423 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A1W2PRF3 423 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A1W2PRM7 423 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 F8VRH5 84 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 H0Y8G0 127 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 H3BTX0 84 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 K7EMT4 169 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 M0R3E3 92 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TNRC18O15417 2968 aaPredicted RBP1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 NCR2O95944 276 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 TSHBP01222 138 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 NPYP01303 97 aa1.53□□□□□ -2.16
SNRNP40-207ENST00000491106 APELAP0DMC3 54 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms